RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
FOXF1-201ENST00000262426 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
FOXF1-201ENST00000262426 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
FOXF1-201ENST00000262426 MAP3K15Q6ZN16 1313 aa17.48■□□□□ 0.39
FOXF1-201ENST00000262426 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
FOXF1-201ENST00000262426 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
FOXF1-201ENST00000262426 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
FOXF1-201ENST00000262426 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
FOXF1-201ENST00000262426 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
FOXF1-201ENST00000262426 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
FOXF1-201ENST00000262426 NEK4P51957 841 aa17.47■□□□□ 0.39
FOXF1-201ENST00000262426 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
FOXF1-201ENST00000262426 ATG9AQ7Z3C6 839 aa17.46■□□□□ 0.39
FOXF1-201ENST00000262426 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
FOXF1-201ENST00000262426 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
FOXF1-201ENST00000262426 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
FOXF1-201ENST00000262426 BCL9LQ86UU0 1499 aa17.46■□□□□ 0.39
FOXF1-201ENST00000262426 GPATCH3Q96I76 525 aa17.46■□□□□ 0.38
FOXF1-201ENST00000262426 SLIT2O94813 1529 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 CPA1P15085 419 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
FOXF1-201ENST00000262426 TAF7LQ5H9L4 462 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 BICDL1Q6ZP65 573 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
FOXF1-201ENST00000262426 FSD1Q9BTV5 496 aa17.45■□□□□ 0.38
FOXF1-201ENST00000262426 PTH1RQ03431 593 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 GREM2Q9H772 168 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 UBN2Q6ZU65 1347 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 K7ELQ4 463 aaPredicted RBP17.44■□□□□ 0.38
FOXF1-201ENST00000262426 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 TPRNQ4KMQ1 711 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 PAPPAQ13219 1627 aa17.44■□□□□ 0.38
FOXF1-201ENST00000262426 SNAP23O00161 211 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 BARGINQ6ZT62 677 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 SNRKQ9NRH2 765 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 JCADQ9P266 1359 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 SGSM2O43147 1006 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 CCDC24Q8N4L8 307 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
FOXF1-201ENST00000262426 CBX1P83916 185 aa17.43■□□□□ 0.38
FOXF1-201ENST00000262426 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
FOXF1-201ENST00000262426 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
FOXF1-201ENST00000262426 AOX1Q06278 1338 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
FOXF1-201ENST00000262426 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 ZBTB38Q8NAP3 1195 aaPredicted RBP17.42■□□□□ 0.38
FOXF1-201ENST00000262426 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
FOXF1-201ENST00000262426 SNX21Q969T3 373 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 A0A0D9SFI3 127 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
FOXF1-201ENST00000262426 COL9A3Q14050 684 aaPredicted RBP17.42■□□□□ 0.38
FOXF1-201ENST00000262426 RABEP1Q15276 862 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 VPS72Q15906 364 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 CHMP5Q9NZZ3 219 aa17.42■□□□□ 0.38
FOXF1-201ENST00000262426 LRP6O75581 1613 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 EIF5P55010 431 aaKnown RBP17.41■□□□□ 0.38
FOXF1-201ENST00000262426 SUSD4Q5VX71 490 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
FOXF1-201ENST00000262426 EYA2O00167 538 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 ADORA1P30542 326 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 IL6STP40189 918 aaPredicted RBP17.41■□□□□ 0.38
FOXF1-201ENST00000262426 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
FOXF1-201ENST00000262426 ITGA6P23229 1130 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
FOXF1-201ENST00000262426 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
FOXF1-201ENST00000262426 IFIT5Q13325 482 aaKnown RBP17.4■□□□□ 0.38
FOXF1-201ENST00000262426 FOXD4L5Q5VV16 416 aaPredicted RBP17.4■□□□□ 0.38
FOXF1-201ENST00000262426 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
FOXF1-201ENST00000262426 FOXD4L4Q8WXT5 416 aaPredicted RBP17.4■□□□□ 0.38
FOXF1-201ENST00000262426 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
FOXF1-201ENST00000262426 ZBTB22O15209 634 aa17.4■□□□□ 0.38
FOXF1-201ENST00000262426 TTLL11Q8NHH1 800 aa17.4■□□□□ 0.38
FOXF1-201ENST00000262426 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
FOXF1-201ENST00000262426 PI16Q6UXB8 463 aa17.39■□□□□ 0.38
FOXF1-201ENST00000262426 GOLIM4O00461 696 aa17.39■□□□□ 0.37
FOXF1-201ENST00000262426 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
FOXF1-201ENST00000262426 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
FOXF1-201ENST00000262426 ZNF589Q86UQ0 364 aaPredicted RBP17.39■□□□□ 0.37
FOXF1-201ENST00000262426 FNBP4Q8N3X1 1017 aaPredicted RBP17.39■□□□□ 0.37
FOXF1-201ENST00000262426 LSG1Q9H089 658 aaKnown RBP17.39■□□□□ 0.37
FOXF1-201ENST00000262426 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
FOXF1-201ENST00000262426 PKP1Q13835 747 aa17.39■□□□□ 0.37
FOXF1-201ENST00000262426 AFF2P51816 1311 aa17.39■□□□□ 0.37
FOXF1-201ENST00000262426 DNTTIP2Q5QJE6 756 aaKnown RBP17.38■□□□□ 0.37
FOXF1-201ENST00000262426 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
FOXF1-201ENST00000262426 KCNJ4P48050 445 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 FKBP4Q02790 459 aaKnown RBP eCLIP17.38■□□□□ 0.37
FOXF1-201ENST00000262426 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 TAF6LQ9Y6J9 622 aa17.38■□□□□ 0.37
FOXF1-201ENST00000262426 ZSCAN30Q86W11 494 aa17.37■□□□□ 0.37
FOXF1-201ENST00000262426 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms