RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 EPB41L2O43491 1005 aaKnown RBP21.55■■□□□ 1.04
SSB-201ENST00000260956 MCM4P33991 863 aa21.55■■□□□ 1.04
SSB-201ENST00000260956 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
SSB-201ENST00000260956 BICC1Q9H694 974 aaKnown RBP21.55■■□□□ 1.04
SSB-201ENST00000260956 BCL2L12Q9HB09 334 aa21.55■■□□□ 1.04
SSB-201ENST00000260956 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
SSB-201ENST00000260956 USPL1Q5W0Q7 1092 aa21.55■■□□□ 1.04
SSB-201ENST00000260956 MYL6BP14649 208 aa21.54■■□□□ 1.04
SSB-201ENST00000260956 RAB3GAP1Q15042 981 aa21.54■■□□□ 1.04
SSB-201ENST00000260956 PA2G4Q9UQ80 394 aaKnown RBP21.54■■□□□ 1.04
SSB-201ENST00000260956 RIC3Q7Z5B4 369 aa21.53■■□□□ 1.04
SSB-201ENST00000260956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.53■■□□□ 1.04
SSB-201ENST00000260956 CASP7P55210 303 aa21.52■■□□□ 1.04
SSB-201ENST00000260956 EPHA10Q5JZY3 1008 aa21.52■■□□□ 1.04
SSB-201ENST00000260956 NARFQ9UHQ1 456 aa21.52■■□□□ 1.04
SSB-201ENST00000260956 SASH1O94885 1247 aa21.52■■□□□ 1.03
SSB-201ENST00000260956 ANKRD13DQ6ZTN6 518 aa21.52■■□□□ 1.03
SSB-201ENST00000260956 ERC1Q8IUD2 1116 aa21.52■■□□□ 1.03
SSB-201ENST00000260956 LRP5O75197 1615 aa21.52■■□□□ 1.03
SSB-201ENST00000260956 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
SSB-201ENST00000260956 RABL6Q3YEC7 729 aaPredicted RBP21.51■■□□□ 1.03
SSB-201ENST00000260956 MYD88Q99836 296 aa21.51■■□□□ 1.03
SSB-201ENST00000260956 CAMTA2O94983 1202 aa21.5■■□□□ 1.03
SSB-201ENST00000260956 ANAPC15P60006 121 aa21.5■■□□□ 1.03
SSB-201ENST00000260956 TTLL7Q6ZT98 887 aa21.5■■□□□ 1.03
SSB-201ENST00000260956 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
SSB-201ENST00000260956 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
SSB-201ENST00000260956 DZIP3Q86Y13 1208 aaKnown RBP21.49■■□□□ 1.03
SSB-201ENST00000260956 RILPL2Q969X0 211 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 ARXQ96QS3 562 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 ZPR1O75312 459 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 MMP10P09238 476 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 NEXNQ0ZGT2 675 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 CLEC17AQ6ZS10 378 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 PLBD2Q8NHP8 589 aa21.49■■□□□ 1.03
SSB-201ENST00000260956 SGSM2O43147 1006 aa21.48■■□□□ 1.03
SSB-201ENST00000260956 GLRX3O76003 335 aaKnown RBP21.48■■□□□ 1.03
SSB-201ENST00000260956 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
SSB-201ENST00000260956 TNPO1Q92973 898 aaKnown RBP21.48■■□□□ 1.03
SSB-201ENST00000260956 DDR1Q08345 913 aa21.47■■□□□ 1.03
SSB-201ENST00000260956 RAD50Q92878 1312 aa21.47■■□□□ 1.03
SSB-201ENST00000260956 CYP2E1P05181 493 aaPredicted RBP21.46■■□□□ 1.03
SSB-201ENST00000260956 TM4SF1P30408 202 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 HLFQ16534 295 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
SSB-201ENST00000260956 ECHDC1Q9NTX5 307 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 A0A087WZG4 1122 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 NFIXQ14938 502 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
SSB-201ENST00000260956 COPRSQ9NQ92 184 aa21.46■■□□□ 1.03
SSB-201ENST00000260956 TBC1D9BQ66K14 1250 aa21.45■■□□□ 1.02
SSB-201ENST00000260956 LSG1Q9H089 658 aaKnown RBP21.45■■□□□ 1.02
SSB-201ENST00000260956 POLD1P28340 1107 aa21.44■■□□□ 1.02
SSB-201ENST00000260956 HSPA4P34932 840 aa21.44■■□□□ 1.02
SSB-201ENST00000260956 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
SSB-201ENST00000260956 CNTROBQ8N137 903 aa21.44■■□□□ 1.02
SSB-201ENST00000260956 ST18O60284 1047 aa21.43■■□□□ 1.02
SSB-201ENST00000260956 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
SSB-201ENST00000260956 FHDC1Q9C0D6 1143 aaPredicted RBP21.43■■□□□ 1.02
SSB-201ENST00000260956 ANO2Q9NQ90 1003 aa21.43■■□□□ 1.02
SSB-201ENST00000260956 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
SSB-201ENST00000260956 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
SSB-201ENST00000260956 POLRMTO00411 1230 aaKnown RBP21.42■■□□□ 1.02
SSB-201ENST00000260956 PTPN12Q05209 780 aaKnown RBP21.42■■□□□ 1.02
SSB-201ENST00000260956 AACSQ86V21 672 aa21.42■■□□□ 1.02
SSB-201ENST00000260956 SNRKQ9NRH2 765 aa21.42■■□□□ 1.02
SSB-201ENST00000260956 FOXD4L1Q9NU39 408 aa21.42■■□□□ 1.02
SSB-201ENST00000260956 PPP1R1BQ9UD71 204 aaPredicted RBP21.42■■□□□ 1.02
SSB-201ENST00000260956 SCN7AQ01118 1682 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 H7C1W4 665 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
SSB-201ENST00000260956 MAP3K15Q6ZN16 1313 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 UBE3BQ7Z3V4 1068 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 KLHDC4Q8TBB5 520 aa21.41■■□□□ 1.02
SSB-201ENST00000260956 MCCP23508 829 aa21.4■■□□□ 1.02
SSB-201ENST00000260956 G3BP1Q13283 466 aaKnown RBP eCLIP21.4■■□□□ 1.021e-6■□□□□ 10
SSB-201ENST00000260956 CUL4AQ13619 759 aa21.4■■□□□ 1.02
SSB-201ENST00000260956 ATP5J2-PTCD1G3V325 749 aa21.39■■□□□ 1.01
SSB-201ENST00000260956 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.01
SSB-201ENST00000260956 FOXO4P98177 505 aa21.39■■□□□ 1.01
SSB-201ENST00000260956 SYT17Q9BSW7 474 aa21.39■■□□□ 1.01
SSB-201ENST00000260956 BCORQ6W2J9 1755 aa21.39■■□□□ 1.01
SSB-201ENST00000260956 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 IL27Q8NEV9 243 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 KCNB2Q92953 911 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 GPATCH3Q96I76 525 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 ERVV-1B6SEH8 477 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
SSB-201ENST00000260956 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
SSB-201ENST00000260956 HSP90AA1P07900 732 aaKnown RBP21.37■■□□□ 1.01
SSB-201ENST00000260956 MCM2P49736 904 aa21.37■■□□□ 1.01
SSB-201ENST00000260956 NEK4P51957 841 aa21.37■■□□□ 1.01
SSB-201ENST00000260956 KLHL34Q8N239 644 aa21.37■■□□□ 1.01
SSB-201ENST00000260956 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
SSB-201ENST00000260956 EVI5LQ96CN4 794 aa21.37■■□□□ 1.01
SSB-201ENST00000260956 TMX3Q96JJ7 454 aa21.37■■□□□ 1.01
SSB-201ENST00000260956 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
SSB-201ENST00000260956 PARP3Q9Y6F1 533 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms