RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
DDX56-201ENST00000258772 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
DDX56-201ENST00000258772 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
DDX56-201ENST00000258772 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
DDX56-201ENST00000258772 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
DDX56-201ENST00000258772 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
DDX56-201ENST00000258772 TFCP2Q12800 502 aa18.12■□□□□ 0.49
DDX56-201ENST00000258772 MPNDQ8N594 471 aa18.12■□□□□ 0.49
DDX56-201ENST00000258772 ELP1O95163 1332 aa18.12■□□□□ 0.49
DDX56-201ENST00000258772 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
DDX56-201ENST00000258772 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
DDX56-201ENST00000258772 RABL6Q3YEC7 729 aaPredicted RBP18.11■□□□□ 0.49
DDX56-201ENST00000258772 FAM173BQ6P4H8 233 aa18.11■□□□□ 0.49
DDX56-201ENST00000258772 ZNF830Q96NB3 372 aaPredicted RBP18.11■□□□□ 0.49
DDX56-201ENST00000258772 KIF1AQ12756 1690 aa18.11■□□□□ 0.49
DDX56-201ENST00000258772 ALS2Q96Q42 1657 aa18.11■□□□□ 0.49
DDX56-201ENST00000258772 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
DDX56-201ENST00000258772 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
DDX56-201ENST00000258772 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
DDX56-201ENST00000258772 COL15A1P39059 1388 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 UQCRHLA0A096LP55 91 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 UQCRHP07919 91 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 KRT32Q14532 448 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 PDCL3Q9H2J4 239 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 MEGF6O75095 1541 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
DDX56-201ENST00000258772 CCDC192P0DO97 292 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 STK3Q13188 491 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 SASS6Q6UVJ0 657 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 PIBF1Q8WXW3 757 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 NDUFB9Q9Y6M9 179 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 NEK1Q96PY6 1258 aa18.09■□□□□ 0.49
DDX56-201ENST00000258772 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
DDX56-201ENST00000258772 TTC12Q9H892 705 aaPredicted RBP18.09■□□□□ 0.49
DDX56-201ENST00000258772 A0A087WZG4 1122 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 CYP27B1O15528 508 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 PTCD1O75127 700 aaKnown RBP18.08■□□□□ 0.48
DDX56-201ENST00000258772 GLIPR1L2Q4G1C9 344 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.48
DDX56-201ENST00000258772 AP5Z1O43299 807 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 LIG1P18858 919 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 PLCB2Q00722 1185 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 HAUS7Q99871 368 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 ZNF609O15014 1411 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 CSB-PGBD3P0DP91 1061 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 MCMDC2Q4G0Z9 681 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
DDX56-201ENST00000258772 NUP62CLQ9H1M0 184 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 TFIP11Q9UBB9 837 aaKnown RBP18.07■□□□□ 0.48
DDX56-201ENST00000258772 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
DDX56-201ENST00000258772 COL18A1P39060 1754 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 CHGBP05060 677 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 CASP7P55210 303 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 RBM10P98175 930 aaKnown RBP18.06■□□□□ 0.48
DDX56-201ENST00000258772 NOLC1Q14978 699 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDX56-201ENST00000258772 MAP3K11Q16584 847 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 CCDC129Q6ZRS4 1044 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 GTF3C6Q969F1 213 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 SPATA32Q96LK8 384 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 SEC62Q99442 399 aaKnown RBP18.06■□□□□ 0.48
DDX56-201ENST00000258772 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
DDX56-201ENST00000258772 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
DDX56-201ENST00000258772 CYP21A2P08686 494 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 DYNC1I1O14576 645 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 CAMK4Q16566 473 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 Q6ZUG5 572 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
DDX56-201ENST00000258772 DDX17Q92841 729 aaKnown RBP18.05■□□□□ 0.48
DDX56-201ENST00000258772 ABCC6O95255 1503 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
DDX56-201ENST00000258772 JAK2O60674 1132 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 DNTTIP2Q5QJE6 756 aaKnown RBP18.04■□□□□ 0.48
DDX56-201ENST00000258772 LMBR1LQ6UX01 489 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
DDX56-201ENST00000258772 DACT1Q9NYF0 836 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 CABP4P57796 275 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 FAM200AQ8TCP9 573 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
DDX56-201ENST00000258772 TYRO3Q06418 890 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 KBTBD3Q8NAB2 608 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 PLEKHG2Q9H7P9 1386 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 CHRNA2Q15822 529 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 BRF1Q92994 677 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 TNMDQ9H2S6 317 aa18.03■□□□□ 0.48
DDX56-201ENST00000258772 FOXO4P98177 505 aa18.02■□□□□ 0.48
DDX56-201ENST00000258772 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.48
DDX56-201ENST00000258772 SPTLC3Q9NUV7 552 aa18.02■□□□□ 0.48
DDX56-201ENST00000258772 SH3TC1Q8TE82 1336 aa18.02■□□□□ 0.47
DDX56-201ENST00000258772 H7C1W4 665 aa18.01■□□□□ 0.47
DDX56-201ENST00000258772 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
DDX56-201ENST00000258772 CKAP2LQ8IYA6 745 aa18.01■□□□□ 0.47
DDX56-201ENST00000258772 C17orf53Q8N3J3 647 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms