RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 OLFM4Q6UX06 510 aa23.7■■□□□ 1.38
UPK3B-201ENST00000257632 RTKN2Q8IZC4 609 aa23.7■■□□□ 1.38
UPK3B-201ENST00000257632 GRAPLQ8TC17 118 aaPredicted RBP23.7■■□□□ 1.38
UPK3B-201ENST00000257632 BBOX1O75936 387 aa23.69■■□□□ 1.38
UPK3B-201ENST00000257632 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
UPK3B-201ENST00000257632 SRCIN1Q9C0H9 1055 aa23.69■■□□□ 1.38
UPK3B-201ENST00000257632 LTBP3Q9NS15 1303 aa23.68■■□□□ 1.38
UPK3B-201ENST00000257632 H7C1W4 665 aa23.68■■□□□ 1.38
UPK3B-201ENST00000257632 RARSP54136 660 aaKnown RBP23.68■■□□□ 1.38
UPK3B-201ENST00000257632 MYH3P11055 1940 aa23.68■■□□□ 1.38
UPK3B-201ENST00000257632 TAF1P21675 1872 aa23.68■■□□□ 1.38
UPK3B-201ENST00000257632 CCDC85AQ96PX6 553 aaPredicted RBP23.67■■□□□ 1.38
UPK3B-201ENST00000257632 ALDH1L1O75891 902 aa23.66■■□□□ 1.38
UPK3B-201ENST00000257632 CTSWP56202 376 aa23.66■■□□□ 1.38
UPK3B-201ENST00000257632 FKBP4Q02790 459 aaKnown RBP eCLIP23.66■■□□□ 1.38
UPK3B-201ENST00000257632 ATP6V0A2Q9Y487 856 aa23.66■■□□□ 1.38
UPK3B-201ENST00000257632 CEP350Q5VT06 3117 aa23.65■■□□□ 1.38
UPK3B-201ENST00000257632 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
UPK3B-201ENST00000257632 TMC4Q7Z404 712 aa23.65■■□□□ 1.38
UPK3B-201ENST00000257632 C9orf78Q9NZ63 289 aaPredicted RBP23.65■■□□□ 1.38
UPK3B-201ENST00000257632 NOB1Q9ULX3 412 aaKnown RBP23.65■■□□□ 1.38
UPK3B-201ENST00000257632 KIF16BQ96L93 1317 aa23.64■■□□□ 1.38
UPK3B-201ENST00000257632 PRELPP51888 382 aa23.64■■□□□ 1.37
UPK3B-201ENST00000257632 CELF1Q92879 486 aaKnown RBP23.64■■□□□ 1.37
UPK3B-201ENST00000257632 GRM8O00222 908 aa23.63■■□□□ 1.37
UPK3B-201ENST00000257632 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
UPK3B-201ENST00000257632 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
UPK3B-201ENST00000257632 SEC31BQ9NQW1 1179 aa23.63■■□□□ 1.37
UPK3B-201ENST00000257632 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
UPK3B-201ENST00000257632 TIAM2Q8IVF5 1701 aa23.62■■□□□ 1.37
UPK3B-201ENST00000257632 CASP7P55210 303 aa23.62■■□□□ 1.37
UPK3B-201ENST00000257632 PLA2G12BQ9BX93 195 aa23.62■■□□□ 1.37
UPK3B-201ENST00000257632 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
UPK3B-201ENST00000257632 ZNF277Q9NRM2 450 aaPredicted RBP23.62■■□□□ 1.37
UPK3B-201ENST00000257632 RPS8P62241 208 aaKnown RBP23.61■■□□□ 1.37
UPK3B-201ENST00000257632 SLC51AQ86UW1 340 aa23.61■■□□□ 1.37
UPK3B-201ENST00000257632 TTLL11Q8NHH1 800 aa23.61■■□□□ 1.37
UPK3B-201ENST00000257632 PSMD1Q99460 953 aa23.61■■□□□ 1.37
UPK3B-201ENST00000257632 ZC3H4Q9UPT8 1303 aaKnown RBP23.6■■□□□ 1.37
UPK3B-201ENST00000257632 HSPA6P17066 643 aa23.6■■□□□ 1.37
UPK3B-201ENST00000257632 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
UPK3B-201ENST00000257632 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
UPK3B-201ENST00000257632 KIF3CO14782 793 aa23.59■■□□□ 1.37
UPK3B-201ENST00000257632 DPP8Q6V1X1 898 aaPredicted RBP23.59■■□□□ 1.37
UPK3B-201ENST00000257632 ANKRD18AQ8IVF6 992 aa23.59■■□□□ 1.37
UPK3B-201ENST00000257632 MPNDQ8N594 471 aa23.59■■□□□ 1.37
UPK3B-201ENST00000257632 GREM2Q9H772 168 aa23.59■■□□□ 1.37
UPK3B-201ENST00000257632 IPO8O15397 1037 aaKnown RBP23.58■■□□□ 1.37
UPK3B-201ENST00000257632 BCAR3O75815 825 aa23.58■■□□□ 1.37
UPK3B-201ENST00000257632 IARSP41252 1262 aaKnown RBP23.58■■□□□ 1.37
UPK3B-201ENST00000257632 SUPT20HQ8NEM7 779 aa23.58■■□□□ 1.37
UPK3B-201ENST00000257632 FRAT1Q92837 279 aaPredicted RBP23.58■■□□□ 1.37
UPK3B-201ENST00000257632 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
UPK3B-201ENST00000257632 COL4A1P02462 1669 aa23.57■■□□□ 1.36
UPK3B-201ENST00000257632 LRRC37AA6NMS7 1700 aa23.57■■□□□ 1.36
UPK3B-201ENST00000257632 CCT4P50991 539 aaKnown RBP23.57■■□□□ 1.36
UPK3B-201ENST00000257632 RTL9Q8NET4 1388 aa23.56■■□□□ 1.36
UPK3B-201ENST00000257632 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
UPK3B-201ENST00000257632 ARHGAP45Q92619 1136 aa23.56■■□□□ 1.36
UPK3B-201ENST00000257632 NSFL1CQ9UNZ2 370 aaKnown RBP23.56■■□□□ 1.36
UPK3B-201ENST00000257632 KDM2BQ8NHM5 1336 aa23.56■■□□□ 1.36
UPK3B-201ENST00000257632 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
UPK3B-201ENST00000257632 CSF1RP07333 972 aa23.55■■□□□ 1.36
UPK3B-201ENST00000257632 ITGA6P23229 1130 aa23.55■■□□□ 1.36
UPK3B-201ENST00000257632 JDP2Q8WYK2 163 aa23.55■■□□□ 1.36
UPK3B-201ENST00000257632 PPIP5K2O43314 1243 aa23.54■■□□□ 1.36
UPK3B-201ENST00000257632 NBPF7P0C2Y1 421 aaPredicted RBP23.54■■□□□ 1.36
UPK3B-201ENST00000257632 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
UPK3B-201ENST00000257632 FOXO4P98177 505 aa23.54■■□□□ 1.36
UPK3B-201ENST00000257632 DPY19L2Q6NUT2 758 aa23.54■■□□□ 1.36
UPK3B-201ENST00000257632 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
UPK3B-201ENST00000257632 ANKRD18BA2A2Z9 1011 aa23.53■■□□□ 1.36
UPK3B-201ENST00000257632 LMBR1LQ6UX01 489 aa23.53■■□□□ 1.36
UPK3B-201ENST00000257632 SUCLG2Q96I99 432 aa23.53■■□□□ 1.36
UPK3B-201ENST00000257632 UTYO14607 1347 aa23.53■■□□□ 1.36
UPK3B-201ENST00000257632 GPSM2P81274 684 aa23.52■■□□□ 1.36
UPK3B-201ENST00000257632 IFIT5Q13325 482 aaKnown RBP23.52■■□□□ 1.36
UPK3B-201ENST00000257632 EPHA10Q5JZY3 1008 aa23.52■■□□□ 1.36
UPK3B-201ENST00000257632 ATF7IPQ6VMQ6 1270 aa23.52■■□□□ 1.36
UPK3B-201ENST00000257632 RTFDC1Q9BY42 306 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-201ENST00000257632 NMRK2Q9NPI5 230 aa23.52■■□□□ 1.36
UPK3B-201ENST00000257632 ANKIB1Q9P2G1 1089 aa23.52■■□□□ 1.36
UPK3B-201ENST00000257632 GLTPD2A6NH11 291 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 C6orf229H3BNL8 230 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 AOC3Q16853 763 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 ZKSCAN2Q63HK3 967 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 MPHOSPH8Q99549 860 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 VPS33BQ9H267 617 aa23.51■■□□□ 1.35
UPK3B-201ENST00000257632 TRIM27P14373 513 aa23.5■■□□□ 1.35
UPK3B-201ENST00000257632 CCDC57Q2TAC2 916 aa23.5■■□□□ 1.35
UPK3B-201ENST00000257632 NIM1KQ8IY84 436 aa23.5■■□□□ 1.35
UPK3B-201ENST00000257632 USP44Q9H0E7 712 aa23.5■■□□□ 1.35
UPK3B-201ENST00000257632 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
UPK3B-201ENST00000257632 TAF7LQ5H9L4 462 aa23.49■■□□□ 1.35
UPK3B-201ENST00000257632 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
UPK3B-201ENST00000257632 DUOX1Q9NRD9 1551 aa23.48■■□□□ 1.35
UPK3B-201ENST00000257632 UBTFL1P0CB47 393 aaPredicted RBP23.48■■□□□ 1.35
UPK3B-201ENST00000257632 CLUAP1Q96AJ1 413 aa23.48■■□□□ 1.35
UPK3B-201ENST00000257632 EYA3Q99504 573 aa23.48■■□□□ 1.35
UPK3B-201ENST00000257632 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms