RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 NUCB1Q02818 461 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 PDZRN3Q9UPQ7 1066 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 NOP58Q9Y2X3 529 aaKnown RBP23.77■■□□□ 1.4
SBDS-201ENST00000246868 DDR1Q08345 913 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 G3BP1Q13283 466 aaKnown RBP eCLIP23.77■■□□□ 1.4
SBDS-201ENST00000246868 FAM161AQ3B820 660 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 MSL1Q68DK7 614 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 SLC16A10Q8TF71 515 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 CCDC85AQ96PX6 553 aaPredicted RBP23.77■■□□□ 1.4
SBDS-201ENST00000246868 COPRSQ9NQ92 184 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
SBDS-201ENST00000246868 ABCC12Q96J65 1359 aa23.76■■□□□ 1.39
SBDS-201ENST00000246868 APBB1O00213 710 aa23.76■■□□□ 1.39
SBDS-201ENST00000246868 MMP10P09238 476 aa23.76■■□□□ 1.39
SBDS-201ENST00000246868 RFX5P48382 616 aaPredicted RBP23.76■■□□□ 1.39
SBDS-201ENST00000246868 TAF7LQ5H9L4 462 aa23.76■■□□□ 1.39
SBDS-201ENST00000246868 ERC1Q8IUD2 1116 aa23.76■■□□□ 1.39
SBDS-201ENST00000246868 PA2G4Q9UQ80 394 aaKnown RBP23.76■■□□□ 1.39
SBDS-201ENST00000246868 ANKRD18BA2A2Z9 1011 aa23.75■■□□□ 1.39
SBDS-201ENST00000246868 PRR5LQ6MZQ0 368 aa23.75■■□□□ 1.39
SBDS-201ENST00000246868 CHD1LQ86WJ1 897 aa23.75■■□□□ 1.39
SBDS-201ENST00000246868 GREM2Q9H772 168 aa23.75■■□□□ 1.39
SBDS-201ENST00000246868 ITGA6P23229 1130 aa23.74■■□□□ 1.39
SBDS-201ENST00000246868 PTPN12Q05209 780 aaKnown RBP23.74■■□□□ 1.39
SBDS-201ENST00000246868 ILDR2Q71H61 639 aa23.74■■□□□ 1.39
SBDS-201ENST00000246868 LRRCC1Q9C099 1032 aa23.74■■□□□ 1.39
SBDS-201ENST00000246868 KLHDC4Q8TBB5 520 aa23.73■■□□□ 1.39
SBDS-201ENST00000246868 KIF1BPQ96EK5 621 aa23.73■■□□□ 1.39
SBDS-201ENST00000246868 SIL1Q9H173 461 aa23.73■■□□□ 1.39
SBDS-201ENST00000246868 RTL9Q8NET4 1388 aa23.73■■□□□ 1.39
SBDS-201ENST00000246868 SF3B3Q15393 1217 aaKnown RBP23.73■■□□□ 1.39
SBDS-201ENST00000246868 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
SBDS-201ENST00000246868 RIC1Q4ADV7 1423 aa23.72■■□□□ 1.39
SBDS-201ENST00000246868 CCDC24Q8N4L8 307 aa23.72■■□□□ 1.39
SBDS-201ENST00000246868 FBXO3Q9UK99 471 aa23.71■■□□□ 1.39
SBDS-201ENST00000246868 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.39
SBDS-201ENST00000246868 RHPN1Q8TCX5 695 aa23.7■■□□□ 1.39
SBDS-201ENST00000246868 ZNF594Q96JF6 807 aaPredicted RBP23.7■■□□□ 1.38
SBDS-201ENST00000246868 CDC5LQ99459 802 aaKnown RBP23.7■■□□□ 1.38
SBDS-201ENST00000246868 PDGFDQ9GZP0 370 aaPredicted RBP23.7■■□□□ 1.38
SBDS-201ENST00000246868 NRXN2Q9P2S2 1712 aa23.69■■□□□ 1.38
SBDS-201ENST00000246868 EYA2O00167 538 aa23.69■■□□□ 1.38
SBDS-201ENST00000246868 CIAO1O76071 339 aa23.69■■□□□ 1.38
SBDS-201ENST00000246868 BCL11AQ9H165 835 aa23.69■■□□□ 1.38
SBDS-201ENST00000246868 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
SBDS-201ENST00000246868 R3HDM1Q15032 1099 aaKnown RBP23.68■■□□□ 1.38
SBDS-201ENST00000246868 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
SBDS-201ENST00000246868 SMARCA5O60264 1052 aaPredicted RBP23.67■■□□□ 1.38
SBDS-201ENST00000246868 IGHMBP2P38935 993 aaKnown RBP23.67■■□□□ 1.38
SBDS-201ENST00000246868 IL15P40933 162 aaPredicted RBP23.67■■□□□ 1.38
SBDS-201ENST00000246868 RGS3P49796 1198 aa23.67■■□□□ 1.38
SBDS-201ENST00000246868 LDHAL6AQ6ZMR3 332 aa23.67■■□□□ 1.38
SBDS-201ENST00000246868 DDX46Q7L014 1031 aaKnown RBP23.66■■□□□ 1.38
SBDS-201ENST00000246868 MPHOSPH8Q99549 860 aa23.66■■□□□ 1.38
SBDS-201ENST00000246868 BRIP1Q9BX63 1249 aa23.66■■□□□ 1.38
SBDS-201ENST00000246868 CNNM1Q9NRU3 951 aa23.66■■□□□ 1.38
SBDS-201ENST00000246868 TNRC6CQ9HCJ0 1690 aaKnown RBP23.66■■□□□ 1.38
SBDS-201ENST00000246868 CLASRPQ8N2M8 674 aaKnown RBP23.66■■□□□ 1.38
SBDS-201ENST00000246868 SEC31BQ9NQW1 1179 aa23.66■■□□□ 1.38
SBDS-201ENST00000246868 SKAP1Q86WV1 359 aa23.65■■□□□ 1.38
SBDS-201ENST00000246868 ANKRD18AQ8IVF6 992 aa23.65■■□□□ 1.38
SBDS-201ENST00000246868 RPGRQ92834 1020 aaKnown RBP23.65■■□□□ 1.38
SBDS-201ENST00000246868 IL1RAPL2Q9NP60 686 aa23.65■■□□□ 1.38
SBDS-201ENST00000246868 SASH1O94885 1247 aa23.64■■□□□ 1.38
SBDS-201ENST00000246868 PDE6BP35913 854 aa23.63■■□□□ 1.37
SBDS-201ENST00000246868 LRRC24Q50LG9 513 aa23.63■■□□□ 1.37
SBDS-201ENST00000246868 ATG9AQ7Z3C6 839 aa23.63■■□□□ 1.37
SBDS-201ENST00000246868 MTFR1LQ9H019 292 aa23.63■■□□□ 1.37
SBDS-201ENST00000246868 PDE4AP27815 886 aa23.62■■□□□ 1.37
SBDS-201ENST00000246868 CRY2Q49AN0 593 aa23.62■■□□□ 1.37
SBDS-201ENST00000246868 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
SBDS-201ENST00000246868 CEP126Q9P2H0 1117 aa23.62■■□□□ 1.37
SBDS-201ENST00000246868 ZBTB7AO95365 584 aa23.62■■□□□ 1.37
SBDS-201ENST00000246868 RBM17Q96I25 401 aaKnown RBP23.62■■□□□ 1.37
SBDS-201ENST00000246868 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
SBDS-201ENST00000246868 LRP5O75197 1615 aa23.61■■□□□ 1.37
SBDS-201ENST00000246868 POLD1P28340 1107 aa23.61■■□□□ 1.37
SBDS-201ENST00000246868 TFCP2Q12800 502 aa23.61■■□□□ 1.37
SBDS-201ENST00000246868 MROH5Q6ZUA9 1318 aa23.6■■□□□ 1.37
SBDS-201ENST00000246868 RPS8P62241 208 aaKnown RBP23.6■■□□□ 1.37
SBDS-201ENST00000246868 METTL24Q5JXM2 366 aa23.6■■□□□ 1.37
SBDS-201ENST00000246868 RIPOR2Q9Y4F9 1068 aa23.6■■□□□ 1.37
SBDS-201ENST00000246868 ANKRD31Q8N7Z5 1873 aa23.6■■□□□ 1.37
SBDS-201ENST00000246868 PSDA5PKW4 1024 aaPredicted RBP23.59■■□□□ 1.37
SBDS-201ENST00000246868 IFIT2P09913 472 aaKnown RBP23.59■■□□□ 1.37
SBDS-201ENST00000246868 C16orf71Q8IYS4 520 aaPredicted RBP23.59■■□□□ 1.37
SBDS-201ENST00000246868 SPEF2Q9C093 1822 aa23.59■■□□□ 1.37
SBDS-201ENST00000246868 GRAPQ13588 217 aa23.59■■□□□ 1.37
SBDS-201ENST00000246868 AACSQ86V21 672 aa23.59■■□□□ 1.37
SBDS-201ENST00000246868 GRAPLQ8TC17 118 aaPredicted RBP23.59■■□□□ 1.37
SBDS-201ENST00000246868 GPR108Q9NPR9 543 aa23.59■■□□□ 1.37
SBDS-201ENST00000246868 BSDC1Q9NW68 430 aaPredicted RBP23.59■■□□□ 1.37
SBDS-201ENST00000246868 AKAP2Q9Y2D5 859 aa23.59■■□□□ 1.37
SBDS-201ENST00000246868 CELF1Q92879 486 aaKnown RBP23.58■■□□□ 1.36
SBDS-201ENST00000246868 ATF5Q9Y2D1 282 aaPredicted RBP23.58■■□□□ 1.36
SBDS-201ENST00000246868 HOXA10P31260 410 aaPredicted RBP23.57■■□□□ 1.36
SBDS-201ENST00000246868 TNNI3KQ59H18 835 aa23.57■■□□□ 1.36
SBDS-201ENST00000246868 PLEKHM2Q8IWE5 1019 aa23.57■■□□□ 1.36
SBDS-201ENST00000246868 FPGT-TNNI3KV9GXZ4 949 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms