RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 KDM4AO75164 1064 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 CYP2C19P33261 490 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 PTPRCP08575 1304 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
HOXC13-201ENST00000243056 PHF14O94880 888 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 A1BGP04217 495 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 MEIS3Q99687 375 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 HOXB7P09629 217 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 ANKRD45Q5TZF3 282 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
HOXC13-201ENST00000243056 DBF4Q9UBU7 674 aaPredicted RBP23.63■■□□□ 1.37
HOXC13-201ENST00000243056 HDAC5Q9UQL6 1122 aa23.63■■□□□ 1.37
HOXC13-201ENST00000243056 C5P01031 1676 aa23.62■■□□□ 1.37
HOXC13-201ENST00000243056 SLC4A9Q96Q91 983 aa23.62■■□□□ 1.37
HOXC13-201ENST00000243056 RSPH14Q9UHP6 348 aa23.62■■□□□ 1.37
HOXC13-201ENST00000243056 SMARCA5O60264 1052 aaPredicted RBP23.61■■□□□ 1.37
HOXC13-201ENST00000243056 CDCA7Q9BWT1 371 aaPredicted RBP23.61■■□□□ 1.37
HOXC13-201ENST00000243056 QTRT2Q9H974 415 aaKnown RBP23.61■■□□□ 1.37
HOXC13-201ENST00000243056 RBM6P78332 1123 aaKnown RBP23.61■■□□□ 1.37
HOXC13-201ENST00000243056 PLCB2Q00722 1185 aa23.61■■□□□ 1.37
HOXC13-201ENST00000243056 SPC24Q8NBT2 197 aa23.61■■□□□ 1.37
HOXC13-201ENST00000243056 ZNF397Q8NF99 534 aaPredicted RBP23.61■■□□□ 1.37
HOXC13-201ENST00000243056 NOP2P46087 812 aaKnown RBP23.6■■□□□ 1.37
HOXC13-201ENST00000243056 KCNQ4P56696 695 aa23.6■■□□□ 1.37
HOXC13-201ENST00000243056 FAM193AP78312 1265 aa23.6■■□□□ 1.37
HOXC13-201ENST00000243056 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
HOXC13-201ENST00000243056 C16orf45Q96MC5 204 aaPredicted RBP23.6■■□□□ 1.37
HOXC13-201ENST00000243056 ZNF330Q9Y3S2 320 aaPredicted RBP23.6■■□□□ 1.37
HOXC13-201ENST00000243056 GDPD2Q9HCC8 539 aa23.6■■□□□ 1.37
HOXC13-201ENST00000243056 LOC102724159A0A0B4J2E5 919 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 MYCNP04198 464 aaPredicted RBP23.59■■□□□ 1.37
HOXC13-201ENST00000243056 TNNT3P45378 269 aaPredicted RBP23.59■■□□□ 1.37
HOXC13-201ENST00000243056 PWP2Q15269 919 aaKnown RBP23.59■■□□□ 1.37
HOXC13-201ENST00000243056 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
HOXC13-201ENST00000243056 DNAJC10Q8IXB1 793 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 USP26Q9BXU7 913 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 BRD1O95696 1058 aa23.59■■□□□ 1.37
HOXC13-201ENST00000243056 WNK3Q9BYP7 1800 aa23.58■■□□□ 1.37
HOXC13-201ENST00000243056 COPS6Q7L5N1 327 aa23.58■■□□□ 1.37
HOXC13-201ENST00000243056 CREBRFQ8IUR6 639 aa23.58■■□□□ 1.37
HOXC13-201ENST00000243056 XAGE3Q8WTP9 111 aa23.58■■□□□ 1.37
HOXC13-201ENST00000243056 DDX21Q9NR30 783 aaKnown RBP eCLIP23.58■■□□□ 1.37
HOXC13-201ENST00000243056 BCL9O00512 1426 aa23.58■■□□□ 1.36
HOXC13-201ENST00000243056 GSPT1P15170 499 aaKnown RBP23.58■■□□□ 1.36
HOXC13-201ENST00000243056 TMX1Q9H3N1 280 aa23.58■■□□□ 1.36
HOXC13-201ENST00000243056 SOS1Q07889 1333 aaPredicted RBP23.57■■□□□ 1.36
HOXC13-201ENST00000243056 MAP3K2Q9Y2U5 619 aa23.57■■□□□ 1.36
HOXC13-201ENST00000243056 ADCY9O60503 1353 aa23.57■■□□□ 1.36
HOXC13-201ENST00000243056 KCPQ6ZWJ8 1503 aa23.57■■□□□ 1.36
HOXC13-201ENST00000243056 ITGB4P16144 1822 aa23.56■■□□□ 1.36
HOXC13-201ENST00000243056 ST18O60284 1047 aa23.56■■□□□ 1.36
HOXC13-201ENST00000243056 TPM3P06753 285 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 FOXD4L6Q3SYB3 417 aaPredicted RBP23.55■■□□□ 1.36
HOXC13-201ENST00000243056 FOXD4L3Q6VB84 417 aaPredicted RBP23.55■■□□□ 1.36
HOXC13-201ENST00000243056 SIRT2Q8IXJ6 389 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 CCDC112Q8NEF3 446 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 KIF1BPQ96EK5 621 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 NOL10Q9BSC4 688 aaKnown RBP23.55■■□□□ 1.36
HOXC13-201ENST00000243056 GLI3P10071 1580 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
HOXC13-201ENST00000243056 FBXO38Q6PIJ6 1188 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 LRP10Q7Z4F1 713 aa23.55■■□□□ 1.36
HOXC13-201ENST00000243056 DHX16O60231 1041 aaKnown RBP23.54■■□□□ 1.36
HOXC13-201ENST00000243056 KCNG1Q9UIX4 513 aa23.54■■□□□ 1.36
HOXC13-201ENST00000243056 TNNT1P13805 278 aa23.54■■□□□ 1.36
HOXC13-201ENST00000243056 PTGS1P23219 599 aa23.54■■□□□ 1.36
HOXC13-201ENST00000243056 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
HOXC13-201ENST00000243056 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.54■■□□□ 1.36
HOXC13-201ENST00000243056 TRPC5Q9UL62 973 aaPredicted RBP23.54■■□□□ 1.36
HOXC13-201ENST00000243056 PRR29P0C7W0 189 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.53■■□□□ 1.36
HOXC13-201ENST00000243056 V9GYY5 206 aaPredicted RBP23.53■■□□□ 1.36
HOXC13-201ENST00000243056 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 USP48Q86UV5 1035 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 ZNF446Q9NWS9 450 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 HYPKQ9NX55 129 aa23.53■■□□□ 1.36
HOXC13-201ENST00000243056 CCDC183Q5T5S1 534 aa23.52■■□□□ 1.36
HOXC13-201ENST00000243056 TTLL7Q6ZT98 887 aa23.52■■□□□ 1.36
HOXC13-201ENST00000243056 RASSF4Q9H2L5 321 aa23.52■■□□□ 1.36
HOXC13-201ENST00000243056 REC8O95072 547 aa23.51■■□□□ 1.35
HOXC13-201ENST00000243056 NBPF7P0C2Y1 421 aaPredicted RBP23.5■■□□□ 1.35
HOXC13-201ENST00000243056 CCT4P50991 539 aaKnown RBP23.5■■□□□ 1.35
HOXC13-201ENST00000243056 GTF2A1P52655 376 aaPredicted RBP23.5■■□□□ 1.35
HOXC13-201ENST00000243056 BEND3Q5T5X7 828 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 RIC3Q7Z5B4 369 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 USP44Q9H0E7 712 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 GYS2P54840 703 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 LRMPQ12912 555 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 PAXBP1Q9Y5B6 917 aa23.5■■□□□ 1.35
HOXC13-201ENST00000243056 KSR2Q6VAB6 950 aa23.49■■□□□ 1.35
HOXC13-201ENST00000243056 GCC1Q96CN9 775 aa23.49■■□□□ 1.35
HOXC13-201ENST00000243056 ZNF215Q9UL58 517 aaPredicted RBP23.49■■□□□ 1.35
HOXC13-201ENST00000243056 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
HOXC13-201ENST00000243056 CLGNO14967 610 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms