RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 APOBRQ0VD83 1088 aa19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 PPP4R3BQ5MIZ7 849 aa19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 ZNF652Q9Y2D9 606 aa19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 MFSD6Q6ZSS7 791 aa19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 LGR6Q9HBX8 967 aa19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 V9GYY5 206 aaPredicted RBP19.83■□□□□ 0.76
SLC1A4-201ENST00000234256 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 LMOD1P29536 600 aaPredicted RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 FBXO3Q9UK99 471 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 SYKP43405 635 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 SYCP1Q15431 976 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 ALG1Q9BT22 464 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 RNF41Q9H4P4 317 aaPredicted RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 BICC1Q9H694 974 aaKnown RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 SKILP12757 684 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 TRERF1Q96PN7 1200 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 LUC7LQ9NQ29 371 aaKnown RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 NDUFB9Q9Y6M9 179 aa19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 YTHDC2Q9H6S0 1430 aaKnown RBP19.82■□□□□ 0.76
SLC1A4-201ENST00000234256 CCDC194A0A1B0GVG4 234 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 TFCP2Q12800 502 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 ZNF444Q8N0Y2 327 aaPredicted RBP19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 ZBTB9Q96C00 473 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 RXRAP19793 462 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 HOXC9P31274 260 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 TYRO3Q06418 890 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 ZPR1O75312 459 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 IDEP14735 1019 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
SLC1A4-201ENST00000234256 AOPEPQ8N6M6 819 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 ZBTB43O43298 467 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 KIF5CO60282 957 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 EIF3JO75822 258 aaKnown RBP19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 TAF3Q5VWG9 929 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 ZCRB1Q8TBF4 217 aaKnown RBP19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 CHAMP1Q96JM3 812 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 PTPRTO14522 1441 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 SNW1Q13573 536 aaKnown RBP19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 NUP88Q99567 741 aaPredicted RBP19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 PAG1Q9NWQ8 432 aa19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
SLC1A4-201ENST00000234256 TSPY2A6NKD2 308 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 AFMP43652 599 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 CCDC129Q6ZRS4 1044 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 STX8Q9UNK0 236 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 ZNF76P36508 570 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 INTS4Q96HW7 963 aaKnown RBP19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 NPHP3Q7Z494 1330 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 GNG11P61952 73 aa19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 TRMT1LQ7Z2T5 733 aaKnown RBP19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 ZHX1Q9UKY1 873 aaPredicted RBP19.79■□□□□ 0.76
SLC1A4-201ENST00000234256 GSDMDP57764 484 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 MRPS27Q92552 414 aaKnown RBP19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 TTC41PQ6P2S7 1318 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 ABCC1P33527 1531 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 FAM227BQ96M60 508 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 PRC1O43663 620 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 SEC63Q9UGP8 760 aaKnown RBP19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 WDR7Q9Y4E6 1490 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 PTGS1P23219 599 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 CEP135Q66GS9 1140 aa19.78■□□□□ 0.76
SLC1A4-201ENST00000234256 UBASH3AP57075 661 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 CADPS2Q86UW7 1296 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 CCDC171Q6TFL3 1326 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 MAP3K5Q99683 1374 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 UBA7P41226 1012 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 TTF1Q15361 905 aaPredicted RBP19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 UBA5Q9GZZ9 404 aa19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 RNF216Q9NWF9 866 aaPredicted RBP19.77■□□□□ 0.76
SLC1A4-201ENST00000234256 NEMFO60524 1076 aa19.77■□□□□ 0.75
SLC1A4-201ENST00000234256 CASQ1P31415 396 aa19.77■□□□□ 0.75
SLC1A4-201ENST00000234256 DYNC1I1O14576 645 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 PRKCSHP14314 528 aaPredicted RBP19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 TMEM132AQ24JP5 1023 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 ABCC10Q5T3U5 1492 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 USP19O94966 1318 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 WTAPQ15007 396 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 PTPDC1A2A3K4 754 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 RUFY3Q7L099 469 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 CACNA2D4Q7Z3S7 1137 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 DDX21Q9NR30 783 aaKnown RBP eCLIP19.76■□□□□ 0.75
SLC1A4-201ENST00000234256 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 SPA17Q15506 151 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 ZNF219Q9P2Y4 722 aaPredicted RBP19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 CAVIN2O95810 425 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 CYP7A1P22680 504 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 JAKMIP3Q5VZ66 844 aa19.75■□□□□ 0.75
SLC1A4-201ENST00000234256 ACSBG1Q96GR2 724 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms