RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
MDH1-201ENST00000233114 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
MDH1-201ENST00000233114 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 G3V3G9 751 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
MDH1-201ENST00000233114 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 GCKRQ14397 625 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
MDH1-201ENST00000233114 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 JCADQ9P266 1359 aa11.86□□□□□ -0.51
MDH1-201ENST00000233114 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 ZKSCAN1P17029 563 aaPredicted RBP11.85□□□□□ -0.51
MDH1-201ENST00000233114 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 GLI3P10071 1580 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 ARFGEF2Q9Y6D5 1785 aa11.85□□□□□ -0.51
MDH1-201ENST00000233114 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 SASH1O94885 1247 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 PSMA5P28066 241 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 AK2P54819 239 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 ZC3H6P61129 1189 aaKnown RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 ALDH8A1Q9H2A2 487 aaPredicted RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 CYP46A1Q9Y6A2 500 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 MED23Q9ULK4 1368 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 ZSCAN22P10073 491 aaPredicted RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 RABL6Q3YEC7 729 aaPredicted RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
MDH1-201ENST00000233114 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 MAP4K1Q92918 833 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
MDH1-201ENST00000233114 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
MDH1-201ENST00000233114 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
MDH1-201ENST00000233114 ANKRD1Q15327 319 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
MDH1-201ENST00000233114 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.52
MDH1-201ENST00000233114 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
MDH1-201ENST00000233114 STX6O43752 255 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
MDH1-201ENST00000233114 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
MDH1-201ENST00000233114 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
MDH1-201ENST00000233114 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 RBSNQ9H1K0 784 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
MDH1-201ENST00000233114 CSB-PGBD3P0DP91 1061 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 ATP5JP18859 108 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 PTH1RQ03431 593 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 SLC39A6Q13433 755 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 FAM184AQ8NB25 1140 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 JAKMIP1Q96N16 626 aaKnown RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 MYD88Q99836 296 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 PAPPAQ13219 1627 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 CYP27B1O15528 508 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 F13A1P00488 732 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 MCM5P33992 734 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 NMIQ13287 307 aaPredicted RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 KRT32Q14532 448 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
MDH1-201ENST00000233114 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
MDH1-201ENST00000233114 PDCP20941 246 aa11.8□□□□□ -0.52
MDH1-201ENST00000233114 SYT1P21579 422 aa11.8□□□□□ -0.52
MDH1-201ENST00000233114 UBE2HP62256 183 aa11.8□□□□□ -0.52
MDH1-201ENST00000233114 FOXD4L5Q5VV16 416 aaPredicted RBP11.8□□□□□ -0.52
MDH1-201ENST00000233114 FOXD4L4Q8WXT5 416 aaPredicted RBP11.8□□□□□ -0.52
MDH1-201ENST00000233114 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
MDH1-201ENST00000233114 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
MDH1-201ENST00000233114 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 SYCE3A1L190 88 aa11.79□□□□□ -0.52
MDH1-201ENST00000233114 SLC27A2O14975 620 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms