RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 SLC27A2O14975 620 aa16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 PDCP20941 246 aa16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 C11orf57Q6ZUT1 292 aaPredicted RBP16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
PCDHB3-201ENST00000231130 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
PCDHB3-201ENST00000231130 CYP2C19P33261 490 aa16.58■□□□□ 0.24
PCDHB3-201ENST00000231130 DDX19AQ9NUU7 478 aaKnown RBP16.58■□□□□ 0.24
PCDHB3-201ENST00000231130 PSMA5P28066 241 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 SYCP1Q15431 976 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 CLSTN2Q9H4D0 955 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 AOX1Q06278 1338 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 GPS2Q13227 327 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 POLA2Q14181 598 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 ISM2Q6H9L7 571 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
PCDHB3-201ENST00000231130 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 LRRC8AQ8IWT6 810 aa16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
PCDHB3-201ENST00000231130 SKIDA1Q1XH10 827 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 PLA2G4DQ86XP0 818 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 EAF2Q96CJ1 260 aaPredicted RBP16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 BIN1O00499 593 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 TEFQ10587 303 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 ERO1AQ96HE7 468 aa16.55■□□□□ 0.24
PCDHB3-201ENST00000231130 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 ME1P48163 572 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 FAM177A1Q8N128 213 aaPredicted RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 GOLGA6L1Q8N7Z2 621 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 TMEM131LA2VDJ0 1609 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 SMC2O95347 1197 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 PTPN21Q16825 1174 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 MYO1CO00159 1063 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 DHX16O60231 1041 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 TPM4P67936 248 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 GNL2Q13823 731 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 TMCO3Q6UWJ1 677 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
PCDHB3-201ENST00000231130 LMAN1P49257 510 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 Q6ZUG5 572 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 EFCC1Q9HA90 598 aa16.53■□□□□ 0.24
PCDHB3-201ENST00000231130 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 ST5P78524 1137 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 MAP4K1Q92918 833 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 CWC15Q9P013 229 aaKnown RBP16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 LCMT1Q9UIC8 334 aa16.52■□□□□ 0.24
PCDHB3-201ENST00000231130 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.23
PCDHB3-201ENST00000231130 SLFNL1Q499Z3 407 aa16.52■□□□□ 0.23
PCDHB3-201ENST00000231130 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.23
PCDHB3-201ENST00000231130 ZNF446Q9NWS9 450 aa16.52■□□□□ 0.23
PCDHB3-201ENST00000231130 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 FLT4P35916 1363 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 CLCN6P51797 869 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 LRRN4CLQ8ND94 238 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 UBXN4Q92575 508 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
PCDHB3-201ENST00000231130 EPB41L2O43491 1005 aaKnown RBP16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 ANKRD1Q15327 319 aa16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms