RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 PDCD2Q16342 344 aaPredicted RBP6.68□□□□□ -1.34
RFX4-201ENST00000229387 SLC5A9Q2M3M2 681 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 SULT6B1Q6IMI4 303 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 DDX27Q96GQ7 796 aaKnown RBP6.68□□□□□ -1.34
RFX4-201ENST00000229387 COG3Q96JB2 828 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 TBC1D2BQ9UPU7 963 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 LAMC1P11047 1609 aa6.68□□□□□ -1.34
RFX4-201ENST00000229387 SF3A1Q15459 793 aaKnown RBP6.67□□□□□ -1.34
RFX4-201ENST00000229387 CDC37Q16543 378 aaPredicted RBP6.67□□□□□ -1.34
RFX4-201ENST00000229387 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 WDR63Q8IWG1 891 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 NEK11Q8NG66 645 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 TMX4Q9H1E5 349 aaPredicted RBP6.67□□□□□ -1.34
RFX4-201ENST00000229387 RANBP17Q9H2T7 1088 aaKnown RBP6.67□□□□□ -1.34
RFX4-201ENST00000229387 IRAK4Q9NWZ3 460 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 FHOD1Q9Y613 1164 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 NRXN1Q9ULB1 1477 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 IL16Q14005 1332 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 CHMLP26374 656 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 ABL2P42684 1182 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 PDE3AQ14432 1141 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 AMOTQ4VCS5 1084 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 CHRDL2Q6WN34 429 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 CCDC186Q7Z3E2 898 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 EFCAB13Q8IY85 973 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 TEX11Q8IYF3 940 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 OXER1Q8TDS5 423 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 ST7Q9NRC1 585 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 PRR36Q9H6K5 1346 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 RIMS2Q9UQ26 1411 aa6.67□□□□□ -1.34
RFX4-201ENST00000229387 NAIF1Q69YI7 327 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 EXOC4Q96A65 974 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 MMTAG2Q9BU76 263 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 VEZTQ9HBM0 779 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 GLI2P10070 1586 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 NEO1Q92859 1461 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 NEXMIFQ5QGS0 1516 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 EIF3CLB5ME19 914 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 KIF2AO00139 706 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 H2AFXP16104 143 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 TBC1D8BQ0IIM8 1120 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 MVPQ14764 893 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 HDGFL1Q5TGJ6 251 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 LEKR1Q6ZMV7 388 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 TRIM74Q86UV6 250 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 TRIM73Q86UV7 250 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 C8orf58Q8NAV2 365 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 SPATA32Q96LK8 384 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 EIF3CQ99613 913 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 CCDC61Q9Y6R9 512 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 ABCC11Q96J66 1382 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 SKILP12757 684 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 ACTN2P35609 894 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 PLA2G4AP47712 749 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 CRYMQ14894 314 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 ZRSR1Q15695 479 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 SPTY2D1Q68D10 685 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 TTC19Q6DKK2 380 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 FBXO38Q6PIJ6 1188 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 DRAXINQ8NBI3 349 aaPredicted RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 CCDC112Q8NEF3 446 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 NGDNQ8NEJ9 315 aaKnown RBP6.66□□□□□ -1.34
RFX4-201ENST00000229387 ERO1AQ96HE7 468 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 MAF1Q9H063 256 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 PCDHGA4Q9Y5G9 962 aa6.66□□□□□ -1.34
RFX4-201ENST00000229387 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 GOLGA6BA6NDN3 693 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 GRXCR2A6NFK2 248 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 TMCO5BA8MYB1 307 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 CYP2E1P05181 493 aaPredicted RBP6.65□□□□□ -1.34
RFX4-201ENST00000229387 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 MAP2K5Q13163 448 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 ATF7IPQ6VMQ6 1270 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 ADAMTS19Q8TE59 1207 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 ZNF483Q8TF39 744 aaPredicted RBP6.65□□□□□ -1.34
RFX4-201ENST00000229387 SLX1AQ9BQ83 275 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 TSPY26PQ9H489 355 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 TTC12Q9H892 705 aaPredicted RBP6.65□□□□□ -1.34
RFX4-201ENST00000229387 GOPCQ9HD26 462 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 GNL3LQ9NVN8 582 aaKnown RBP6.65□□□□□ -1.34
RFX4-201ENST00000229387 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 LMTK2Q8IWU2 1503 aa6.65□□□□□ -1.34
RFX4-201ENST00000229387 MBD3O95983 291 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 MYBL2P10244 700 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 GCFC2P16383 781 aaKnown RBP6.65□□□□□ -1.35
RFX4-201ENST00000229387 TAGLNQ01995 201 aaKnown RBP6.65□□□□□ -1.35
RFX4-201ENST00000229387 PDIA5Q14554 519 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 TTLL5Q6EMB2 1281 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 DNAAF4Q8WXU2 420 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 SMARCE1Q969G3 411 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 RWDD1Q9H446 243 aaPredicted RBP6.65□□□□□ -1.35
RFX4-201ENST00000229387 MBIPQ9NS73 344 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 USP25Q9UHP3 1055 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 ACEP12821 1306 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 PPIP5K1Q6PFW1 1433 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 CAMSAP1Q5T5Y3 1602 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 QRICH2Q9H0J4 1663 aa6.65□□□□□ -1.35
RFX4-201ENST00000229387 SSFA2P28290 1259 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms