RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ARID3AQ99856 593 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 SNRKQ9NRH2 765 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 ELP1O95163 1332 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 PDIA4P13667 645 aaKnown RBP20.78■□□□□ 0.92
PRPF19-201ENST00000227524 KSR2Q6VAB6 950 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 ZNF710Q8N1W2 664 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
PRPF19-201ENST00000227524 PARP4Q9UKK3 1724 aaKnown RBP20.77■□□□□ 0.92
PRPF19-201ENST00000227524 MRC1P22897 1456 aa20.77■□□□□ 0.92
PRPF19-201ENST00000227524 PSMA5P28066 241 aa20.77■□□□□ 0.92
PRPF19-201ENST00000227524 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
PRPF19-201ENST00000227524 CWF19L2Q2TBE0 894 aaKnown RBP20.77■□□□□ 0.92
PRPF19-201ENST00000227524 TSC1Q92574 1164 aa20.77■□□□□ 0.92
PRPF19-201ENST00000227524 PYCARDQ9ULZ3 195 aa20.77■□□□□ 0.92
PRPF19-201ENST00000227524 GIGYF1O75420 1035 aaPredicted RBP20.76■□□□□ 0.91
PRPF19-201ENST00000227524 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
PRPF19-201ENST00000227524 SLC52A2Q9HAB3 445 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 SASH1O94885 1247 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 LIG1P18858 919 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 MAP3K11Q16584 847 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 FERMT3Q86UX7 667 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 FAM200AQ8TCP9 573 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 CCDC94Q9BW85 323 aaPredicted RBP20.76■□□□□ 0.91
PRPF19-201ENST00000227524 NUP62CLQ9H1M0 184 aa20.76■□□□□ 0.91
PRPF19-201ENST00000227524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.76■□□□□ 0.91
PRPF19-201ENST00000227524 AHDC1Q5TGY3 1603 aaPredicted RBP20.76■□□□□ 0.91
PRPF19-201ENST00000227524 PRAMEF22A3QJZ6 481 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 PDCP20941 246 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 TOM1L2Q6ZVM7 507 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 SPC24Q8NBT2 197 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 EAF2Q96CJ1 260 aaPredicted RBP20.75■□□□□ 0.91
PRPF19-201ENST00000227524 SUCLG2Q96I99 432 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 GOLGA6L6A8MZA4 724 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
PRPF19-201ENST00000227524 A0A0D9SFI3 127 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 TYRO3Q06418 890 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 ANKRD1Q15327 319 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 FAM173BQ6P4H8 233 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 BLOC1S2Q6QNY1 142 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 MED23Q9ULK4 1368 aa20.74■□□□□ 0.91
PRPF19-201ENST00000227524 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■■□ 20.4
PRPF19-201ENST00000227524 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 CCDC8Q9H0W5 538 aaPredicted RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 ALDH8A1Q9H2A2 487 aaPredicted RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 CHMP3Q9Y3E7 222 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 KIF3AQ9Y496 699 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 UTYO14607 1347 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 GRM8O00222 908 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 RPS6KB1P23443 525 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 RNF20Q5VTR2 975 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 LARP1Q6PKG0 1096 aaKnown RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 SMAP1Q8IYB5 467 aaPredicted RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 BICC1Q9H694 974 aaKnown RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 TLR7Q9NYK1 1049 aaKnown RBP20.73■□□□□ 0.91
PRPF19-201ENST00000227524 JCADQ9P266 1359 aa20.73■□□□□ 0.91
PRPF19-201ENST00000227524 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 LINS1Q8NG48 757 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 FSD1Q9BTV5 496 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 CARD10Q9BWT7 1032 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 C5P01031 1676 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 TOB2Q14106 344 aaPredicted RBP20.72■□□□□ 0.91
PRPF19-201ENST00000227524 CAMK4Q16566 473 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 TCEANC2Q96MN5 208 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 TAF6LQ9Y6J9 622 aa20.72■□□□□ 0.91
PRPF19-201ENST00000227524 COL22A1Q8NFW1 1626 aaPredicted RBP20.71■□□□□ 0.91
PRPF19-201ENST00000227524 SCAND2PQ9GZW5 306 aaPredicted RBP20.71■□□□□ 0.91
PRPF19-201ENST00000227524 TNMDQ9H2S6 317 aa20.7■□□□□ 0.91
PRPF19-201ENST00000227524 BOLA2Q9H3K6 86 aa20.7■□□□□ 0.91
PRPF19-201ENST00000227524 STRN4Q9NRL3 753 aa20.7■□□□□ 0.91
PRPF19-201ENST00000227524 LUZP1Q86V48 1076 aa20.7■□□□□ 0.9
PRPF19-201ENST00000227524 SPATA32Q96LK8 384 aa20.7■□□□□ 0.9
PRPF19-201ENST00000227524 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
PRPF19-201ENST00000227524 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
PRPF19-201ENST00000227524 FAM177BA6PVY3 158 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 PTGS1P23219 599 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 CKAP2LQ8IYA6 745 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 LEO1Q8WVC0 666 aaPredicted RBP20.69■□□□□ 0.9
PRPF19-201ENST00000227524 CBX8Q9HC52 389 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 DDX19AQ9NUU7 478 aaKnown RBP20.69■□□□□ 0.9
PRPF19-201ENST00000227524 HMG20BQ9P0W2 317 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 GLI3P10071 1580 aa20.69■□□□□ 0.9
PRPF19-201ENST00000227524 CHAF1AQ13111 956 aaPredicted RBP20.68■□□□□ 0.9
PRPF19-201ENST00000227524 ANO6Q4KMQ2 910 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 RBM43Q6ZSC3 357 aaKnown RBP20.68■□□□□ 0.9
PRPF19-201ENST00000227524 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
PRPF19-201ENST00000227524 ZCRB1Q8TBF4 217 aaKnown RBP20.68■□□□□ 0.9
PRPF19-201ENST00000227524 PRDM4Q9UKN5 801 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 GOLGA6L4A6NEF3 574 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 TSGA10IPQ3SY00 556 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 SIL1Q9H173 461 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 CLSTN2Q9H4D0 955 aa20.68■□□□□ 0.9
PRPF19-201ENST00000227524 TFIP11Q9UBB9 837 aaKnown RBP20.68■□□□□ 0.9
PRPF19-201ENST00000227524 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
PRPF19-201ENST00000227524 DDX58O95786 925 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms