RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 ABCC12Q96J65 1359 aa20.58■□□□□ 0.88
CHMP5-201ENST00000223500 DCTPP1Q9H773 170 aa20.57■□□□□ 0.88
CHMP5-201ENST00000223500 IFIT5Q13325 482 aaKnown RBP20.56■□□□□ 0.88
CHMP5-201ENST00000223500 NRXN2Q9P2S2 1712 aa20.56■□□□□ 0.88
CHMP5-201ENST00000223500 RIC1Q4ADV7 1423 aa20.56■□□□□ 0.88
CHMP5-201ENST00000223500 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
CHMP5-201ENST00000223500 HSP90AB4PQ58FF6 505 aa20.56■□□□□ 0.88
CHMP5-201ENST00000223500 SMC5Q8IY18 1101 aa20.56■□□□□ 0.88
CHMP5-201ENST00000223500 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 ANKRD18BA2A2Z9 1011 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 SURF6O75683 361 aaKnown RBP20.55■□□□□ 0.88
CHMP5-201ENST00000223500 FAM161AQ3B820 660 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 TAF7LQ5H9L4 462 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 CCDC24Q8N4L8 307 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
CHMP5-201ENST00000223500 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
CHMP5-201ENST00000223500 GREM2Q9H772 168 aa20.54■□□□□ 0.88
CHMP5-201ENST00000223500 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
CHMP5-201ENST00000223500 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
CHMP5-201ENST00000223500 RTL9Q8NET4 1388 aa20.54■□□□□ 0.88
CHMP5-201ENST00000223500 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
CHMP5-201ENST00000223500 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
CHMP5-201ENST00000223500 ITGA6P23229 1130 aa20.53■□□□□ 0.88
CHMP5-201ENST00000223500 RFX5P48382 616 aaPredicted RBP20.53■□□□□ 0.88
CHMP5-201ENST00000223500 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHMP5-201ENST00000223500 OS9Q13438 667 aaPredicted RBP20.53■□□□□ 0.88
CHMP5-201ENST00000223500 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
CHMP5-201ENST00000223500 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
CHMP5-201ENST00000223500 POLD1P28340 1107 aa20.52■□□□□ 0.88
CHMP5-201ENST00000223500 PTPN12Q05209 780 aaKnown RBP20.52■□□□□ 0.88
CHMP5-201ENST00000223500 BRIP1Q9BX63 1249 aa20.52■□□□□ 0.88
CHMP5-201ENST00000223500 EXOC6BQ9Y2D4 811 aa20.52■□□□□ 0.88
CHMP5-201ENST00000223500 ERC1Q8IUD2 1116 aa20.51■□□□□ 0.87
CHMP5-201ENST00000223500 PA2G4Q9UQ80 394 aaKnown RBP20.51■□□□□ 0.87
CHMP5-201ENST00000223500 PDE6BP35913 854 aa20.5■□□□□ 0.87
CHMP5-201ENST00000223500 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
CHMP5-201ENST00000223500 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
CHMP5-201ENST00000223500 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
CHMP5-201ENST00000223500 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
CHMP5-201ENST00000223500 DDX46Q7L014 1031 aaKnown RBP20.5■□□□□ 0.87
CHMP5-201ENST00000223500 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
CHMP5-201ENST00000223500 TNRC6CQ9HCJ0 1690 aaKnown RBP20.49■□□□□ 0.87
CHMP5-201ENST00000223500 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
CHMP5-201ENST00000223500 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
CHMP5-201ENST00000223500 SIL1Q9H173 461 aa20.49■□□□□ 0.87
CHMP5-201ENST00000223500 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
CHMP5-201ENST00000223500 ANKRD31Q8N7Z5 1873 aa20.48■□□□□ 0.87
CHMP5-201ENST00000223500 APBB1O00213 710 aa20.48■□□□□ 0.87
CHMP5-201ENST00000223500 KIF1BPQ96EK5 621 aa20.48■□□□□ 0.87
CHMP5-201ENST00000223500 ZNF594Q96JF6 807 aaPredicted RBP20.48■□□□□ 0.87
CHMP5-201ENST00000223500 LRRCC1Q9C099 1032 aa20.48■□□□□ 0.87
CHMP5-201ENST00000223500 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
CHMP5-201ENST00000223500 KLRG2A4D1S0 409 aaPredicted RBP20.47■□□□□ 0.87
CHMP5-201ENST00000223500 EYA2O00167 538 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 CIAO1O76071 339 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
CHMP5-201ENST00000223500 NUCB1Q02818 461 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 CRY2Q49AN0 593 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 LDHAL6AQ6ZMR3 332 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 MPHOSPH8Q99549 860 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 SEC31BQ9NQW1 1179 aa20.47■□□□□ 0.87
CHMP5-201ENST00000223500 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
CHMP5-201ENST00000223500 RBM17Q96I25 401 aaKnown RBP20.46■□□□□ 0.87
CHMP5-201ENST00000223500 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
CHMP5-201ENST00000223500 CHD1LQ86WJ1 897 aa20.45■□□□□ 0.86
CHMP5-201ENST00000223500 RHPN1Q8TCX5 695 aa20.45■□□□□ 0.86
CHMP5-201ENST00000223500 HOXA10P31260 410 aaPredicted RBP20.43■□□□□ 0.86
CHMP5-201ENST00000223500 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
CHMP5-201ENST00000223500 LNPKQ9C0E8 428 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 TAF1P21675 1872 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 H0YIN7 160 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 NPR1P16066 1061 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 GRAPQ13588 217 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
CHMP5-201ENST00000223500 CRAMP1Q96RY5 1269 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
CHMP5-201ENST00000223500 CEP126Q9P2H0 1117 aa20.43■□□□□ 0.86
CHMP5-201ENST00000223500 SPEF2Q9C093 1822 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 C10orf71Q711Q0 1435 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
CHMP5-201ENST00000223500 SASH1O94885 1247 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 C2CD5Q86YS7 1000 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 CLASRPQ8N2M8 674 aaKnown RBP20.42■□□□□ 0.86
CHMP5-201ENST00000223500 CELF1Q92879 486 aaKnown RBP20.42■□□□□ 0.86
CHMP5-201ENST00000223500 MASTLQ96GX5 879 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 BSDC1Q9NW68 430 aaPredicted RBP20.42■□□□□ 0.86
CHMP5-201ENST00000223500 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
CHMP5-201ENST00000223500 MROH5Q6ZUA9 1318 aa20.41■□□□□ 0.86
CHMP5-201ENST00000223500 SRGNP10124 158 aa20.41■□□□□ 0.86
CHMP5-201ENST00000223500 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
CHMP5-201ENST00000223500 SPON1Q9HCB6 807 aa20.41■□□□□ 0.86
CHMP5-201ENST00000223500 LRP5O75197 1615 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 SOCS7O14512 581 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 BBOX1O75936 387 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
CHMP5-201ENST00000223500 TFCP2Q12800 502 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms