RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ALG1Q9BT22 464 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 ACEP12821 1306 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
TGFBR3-201ENST00000212355 USO1O60763 962 aaKnown RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 HMGB1P09429 215 aaKnown RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 CCDC196A0A1B0GTZ2 297 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 N4BP3O15049 544 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 C8orf34Q49A92 452 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 DHX58Q96C10 678 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 SLC4A4Q9Y6R1 1079 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 CWF19L2Q2TBE0 894 aaKnown RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 NCOA7Q8NI08 942 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 PTPRCP08575 1304 aa15.63■□□□□ 0.09
TGFBR3-201ENST00000212355 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 FEZ1Q99689 392 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 GRM1Q13255 1194 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 SKILP12757 684 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 COPS6Q7L5N1 327 aa15.62■□□□□ 0.09
TGFBR3-201ENST00000212355 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 CYP7A1P22680 504 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 C17orf53Q8N3J3 647 aaPredicted RBP15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 BICD1Q96G01 975 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 TRIM21P19474 475 aaKnown RBP15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 UBA7P41226 1012 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 ZBTB21Q9ULJ3 1066 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 RPGRIP1LQ68CZ1 1315 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 PHACTR2O75167 634 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 NF2P35240 595 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 PDE1AP54750 535 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 NOLC1Q14978 699 aaKnown RBP eCLIP15.61■□□□□ 0.095e-7■■□□□ 13.4
TGFBR3-201ENST00000212355 CCDC91Q7Z6B0 441 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 CCDC129Q6ZRS4 1044 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 TCP11L1Q9NUJ3 509 aa15.61■□□□□ 0.09
TGFBR3-201ENST00000212355 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 LZTFL1Q9NQ48 299 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 CTAGE5O15320 804 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 ERCC3P19447 782 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 IFIT1BQ5T764 474 aaKnown RBP15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 CCDC102BQ68D86 513 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 STAT6P42226 847 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 WTAPQ15007 396 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 PLEKHH1Q9ULM0 1364 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 ZNF287Q9HBT7 754 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 TSPY3P0CV98 308 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 TSPY8P0CW00 308 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 SF3A3Q12874 501 aaKnown RBP eCLIP15.6■□□□□ 0.094e-7■■■■■ 31.4
TGFBR3-201ENST00000212355 PPP4R3AQ6IN85 833 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 VPS36Q86VN1 386 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 ALS2CR12Q96Q35 445 aa15.6■□□□□ 0.09
TGFBR3-201ENST00000212355 FERMT2Q96AC1 680 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 NGLY1Q96IV0 654 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 NDUFB9Q9Y6M9 179 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 ZMYND15Q9H091 742 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 RSPH14Q9UHP6 348 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 DESP17661 470 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 AK2P54819 239 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 ANKRD13DQ6ZTN6 518 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 RABEP2Q9H5N1 569 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 PLEKHH2Q8IVE3 1493 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 RHOXF2BP0C7M4 288 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 KLHL40Q2TBA0 621 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 RHOXF2Q9BQY4 288 aa15.59■□□□□ 0.09
TGFBR3-201ENST00000212355 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.09
TGFBR3-201ENST00000212355 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.09
TGFBR3-201ENST00000212355 FAM212AQ96EL1 285 aa15.58■□□□□ 0.09
TGFBR3-201ENST00000212355 MCM7P33993 719 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 CALM1P0DP23 149 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 CALM2P0DP24 149 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 CALM3P0DP25 149 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 SYT1P21579 422 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 LMBR1LQ6UX01 489 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 OTUD7AQ8TE49 926 aaPredicted RBP15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 RNF41Q9H4P4 317 aaPredicted RBP15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 MCM5P33992 734 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 CA8P35219 290 aa15.58■□□□□ 0.08
TGFBR3-201ENST00000212355 EXOC5O00471 708 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 ZBTB43O43298 467 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 KIF20AO95235 890 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
TGFBR3-201ENST00000212355 COMMD10Q9Y6G5 202 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms