RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 JAK2O60674 1132 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 HOXB7P09629 217 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 RPS6KB1P23443 525 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 ZNF165P49910 485 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 THEMISQ8N1K5 641 aaPredicted RBP12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
CX3CL1-201ENST00000006053 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 KSR2Q6VAB6 950 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 ZNF589Q86UQ0 364 aaPredicted RBP12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 DDX19AQ9NUU7 478 aaKnown RBP12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 ELP1O95163 1332 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 ZNF75DP51815 510 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 TOB2Q14106 344 aaPredicted RBP12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 H3BQV1 296 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 TNNT1P13805 278 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 HOMEZQ8IX15 550 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 CLSTN2Q9H4D0 955 aa12.42□□□□□ -0.42
CX3CL1-201ENST00000006053 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 PGBD1Q96JS3 809 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 GRM8O00222 908 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 TPD52L1Q16890 204 aaPredicted RBP12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 ZSCAN25Q6NSZ9 544 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 GTPBP4Q9BZE4 634 aaKnown RBP12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
CX3CL1-201ENST00000006053 BRF1Q92994 677 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 C1orf141Q5JVX7 400 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 CERS3Q8IU89 383 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 IP6K1Q92551 441 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 KAZALD1Q96I82 304 aa12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 CCDC9Q9Y3X0 531 aaKnown RBP12.4□□□□□ -0.42
CX3CL1-201ENST00000006053 UBR1Q8IWV7 1749 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 GIGYF1O75420 1035 aaPredicted RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 AKAP4Q5JQC9 854 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 PPFIA3O75145 1194 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 KCNA6P17658 529 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 PLA2G4DQ86XP0 818 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 TDRD7Q8NHU6 1098 aaKnown RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CHGBP05060 677 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
CX3CL1-201ENST00000006053 A0A087WWV3 80 aa12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 NCBP1Q09161 790 aaKnown RBP12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 Q6ZUG5 572 aa12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 TAF5LO75529 589 aa12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 CCDC112Q8NEF3 446 aa12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 NPHP4O75161 1426 aaPredicted RBP12.38□□□□□ -0.43
CX3CL1-201ENST00000006053 SMTNL1A8MU46 457 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 DDX58O95786 925 aaKnown RBP12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 MYL6BP14649 208 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 ARID5BQ14865 1188 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 FTOQ9C0B1 505 aaKnown RBP eCLIP12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 HMG20BQ9P0W2 317 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 RESTQ13127 1097 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 FILIP1Q7Z7B0 1213 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
CX3CL1-201ENST00000006053 BECN2A8MW95 431 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 C11orf57Q6ZUT1 292 aaPredicted RBP12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 CRYBG1Q9Y4K1 1723 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 ZNF771Q7L3S4 317 aaPredicted RBP12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 KRT32Q14532 448 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 CCAR1Q8IX12 1150 aaKnown RBP12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
CX3CL1-201ENST00000006053 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 ESCO1Q5FWF5 840 aa12.35□□□□□ -0.43
CX3CL1-201ENST00000006053 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms