RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Zmym4A2A791 1549 aaKnown RBP14.25□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Fam177a1Q8BR63 207 aa14.25□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Clip2Q9Z0H8 1047 aa14.25□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Acbd3Q8BMP6 525 aa14.25□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ccdc6D3YZP9 469 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 NpcdF8VQB8 469 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Idi2Q8BFZ6 227 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Anapc15-psA0A140T8L6 141 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Klhl10Q9D5V2 608 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Mapkbp1Q6NS57 1503 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 RbsnQ80Y56 783 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Cdca8Q8BHX3 289 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Fam186bD3Z420 943 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Psmc4P54775 418 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ankrd26Q811D2 1581 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tbc1d5Q80XQ2 815 aa14.24□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Myl6bQ8CI43 207 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Frmpd2A0A140LI67 1392 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 GnaqP21279 359 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Exoc3Q6KAR6 755 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 MthfsQ9D110 203 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Rcan3Q9JKK0 239 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Gm1043A0A140LJC2 1431 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Adcy5P84309 1262 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Mtus1Q5HZI1 1210 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tmem143Q8VD26 458 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tldc2A2ACG1 198 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Sh2d4bA6X942 431 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Gm21985Q6P6P5 1106 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Skida1Q80YR3 822 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Cnot6lQ8VEG6 555 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Taok3Q8BYC6 898 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Krt13P08730 437 aa14.23□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Slc4a4O88343 1079 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tagap1P0CAX8 505 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Fgfr1opQ66JX5 399 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Smarcc2Q6PDG5 1213 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Cyp4f39Q8BGU0 532 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Gbp7Q91Z40 638 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Lrriq1Q0P5X1 1673 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Atp8b3Q6UQ17 1335 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 CebpzP53569 1052 aaKnown RBP14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Stmn4P63042 189 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tex19.1Q99MV2 351 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Spocd1B1ASB6 936 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Cbx1P83917 185 aaKnown RBP14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Pus7B7ZNL8 666 aaKnown RBP14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Cep135Q6P5D4 1140 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Serpinc1P32261 465 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Chpf2Q3UU43 768 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ccnl1Q52KE7 532 aaKnown RBP14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ccdc12Q8R344 166 aaKnown RBP14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Usp11Q99K46 921 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Mug1P28665 1476 aa14.22□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Stat1P42225 749 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Sde2Q8K1J5 448 aaKnown RBP14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Krt25Q8VCW2 446 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Gm28919A0A087WP35 240 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Krt20Q9D312 431 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Letm1Q9Z2I0 738 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Camk4P08414 469 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ehbp1Q69ZW3 1231 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Efcab2Q9CQ46 164 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Ttc12Q8BW49 704 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Tacc3Q9JJ11 631 aa14.21□□□□□ -0.13
Col6a3-208ENSMUST00000188587 Sun3Q5SS91 320 aa14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 U2af1l4Q8BGJ9 220 aa14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ranbp6Q8BIV3 1105 aa14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Brd3Q8K2F0 726 aaKnown RBP14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Gtf2a1Q99PM3 378 aa14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Pdia4P08003 638 aaKnown RBP14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Cers3Q1A3B0 383 aa14.21□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Tbc1d9Q3UYK3 1264 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Mpp4Q6P7F1 635 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Yeats4Q9CR11 227 aaKnown RBP14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ift88Q61371 824 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Pik3ap1Q9EQ32 811 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Slc4a8Q8JZR6 1089 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Echdc1Q9D9V3 322 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Fam107bQ3TGF2 131 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Stoml1Q8CI66 399 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 IntuQ059U7 942 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 PaskQ8CEE6 1383 aa14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 SltmQ8CH25 1031 aaKnown RBP14.2□□□□□ -0.14
Col6a3-208ENSMUST00000188587 RragbQ6NTA4 374 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Dzip1Q8BMD2 852 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 GabpaQ00422 454 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Aplp1Q03157 653 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ankrd49Q8VE42 238 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Mtmr7Q9Z2C9 660 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Gng11P61953 73 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Cabp5Q9JLK3 173 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ppfia1B2RXQ2 1266 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Skap1Q3UUV5 355 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ankrd40Q5SUE8 363 aa14.19□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Gsta4P24472 222 aa14.18□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Ccdc148Q6P5U8 527 aa14.18□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Rbbp8nlA2ABX0 614 aa14.18□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Atp2a2O55143 1044 aaKnown RBP14.18□□□□□ -0.14
Col6a3-208ENSMUST00000188587 Gnat2P50149 354 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms