RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Utp3Q9JI13 469 aaKnown RBP13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Tiam2Q6ZPF3 1715 aa13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Brpf3B2KF05 1204 aaKnown RBP13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Oxsr1Q6P9R2 527 aa13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Dhx38Q80X98 1228 aa13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Rps6ka5Q8C050 863 aa13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Slc39a6Q8C145 765 aa13.77□□□□□ -0.21
Trim11-202ENSMUST00000108809 Bcl9lQ67FY2 1494 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Lins1Q3U1D0 764 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Kcnf1Q7TSH7 493 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 PhaxQ9JJT9 385 aaKnown RBP13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Mmel1Q9JLI3 765 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Wdr78E9PYY5 807 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Cnnm3Q32NY4 713 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Kank4Q6P9J5 1016 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Tubb6Q922F4 447 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Usp44Q8C2S0 711 aa13.76□□□□□ -0.21
Trim11-202ENSMUST00000108809 Mrc1Q61830 1456 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Hmx1O70218 332 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ppp1r10Q80W00 888 aaKnown RBP13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Gm21698A0A087WQP8 267 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Gm21671G3UY31 267 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Bach1P97302 739 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 ZyxQ62523 564 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Mb21d2Q8C525 428 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Plcd3Q8K2J0 785 aa13.75□□□□□ -0.21
Trim11-202ENSMUST00000108809 Zkscan7E9PVW1 718 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Stat1P42225 749 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 GnpatP98192 678 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Cfap157Q0VFX2 523 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Vps54Q5SPW0 977 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Nlrp1aQ2LKU9 1182 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Gnat3Q3V3I2 354 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ankle2Q6P1H6 964 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 ZwintQ9CQU5 252 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Nfe2l3Q9WTM4 660 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Tyro3P55144 880 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Nom1Q3UFM5 854 aaKnown RBP13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Zranb3Q6NZP1 1069 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ddx58Q6Q899 926 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ptcd1Q8C2E4 695 aaKnown RBP13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Srgap1Q91Z69 1062 aa13.74□□□□□ -0.21
Trim11-202ENSMUST00000108809 Lnx1O70263 728 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Neurod6P48986 337 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Trim52Q8CDV4 233 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Lrrfip2Q91WK0 415 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ptgs1P22437 602 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Soga3Q6NZL0 945 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Atg9aQ68FE2 551 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ppp4r3aQ6P2K6 820 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Smarcc2Q6PDG5 1213 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Fam50bQ9WTJ8 334 aa13.73□□□□□ -0.21
Trim11-202ENSMUST00000108809 Sipa1l3G3X9J0 1776 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ubash3aQ3V3E1 624 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Zbtb40Q6PCS8 1258 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Rab3gap1Q80UJ7 981 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Zfp317Q8C0Q5 607 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 LratQ9JI60 231 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Krt85Q9Z2T6 507 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Syde2E9PUP1 1314 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Cyp2d10P24456 504 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 NpeppsQ11011 920 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ano1Q8BHY3 960 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Fam102bQ8BQS4 339 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Shank3Q4ACU6 1730 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Fkbp5Q64378 456 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Efcab2Q9CQ46 164 aa13.72□□□□□ -0.21
Trim11-202ENSMUST00000108809 Sult6b1P0CC03 303 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Csrnp1P59054 583 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ddx17Q501J6 650 aaKnown RBP13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Ddx46Q569Z5 1032 aaKnown RBP13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 NfkbibQ60778 359 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Q8C5K5 320 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Nwd2Q6P5U7 1742 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 TrdnE9Q9K5 693 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 1700113H08RikE9Q9Q5 327 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Tmc2Q8R4P4 888 aa13.71□□□□□ -0.21
Trim11-202ENSMUST00000108809 Sos2Q02384 1333 aa13.71□□□□□ -0.22
Trim11-202ENSMUST00000108809 Irgm2A0A140LIF8 407 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Ccdc129Q14B48 1034 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 4930572O03RikQ8C5Y0 211 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Prl3d3A0A0M6L0J6 224 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Prl7a2O54831 253 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 CgnP59242 1191 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Nucb2P81117 420 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Tmem109Q3UBX0 243 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 RgmbQ7TQ33 436 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Grpel1Q99LP6 217 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 TnmdQ9EP64 317 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Pus3Q9JI38 481 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cavin1O54724 392 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Kif3aP28741 701 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Usp28Q5I043 1051 aa13.7□□□□□ -0.22
Trim11-202ENSMUST00000108809 Exosc10P56960 887 aaKnown RBP13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Kansl3A2RSY1 903 aaKnown RBP13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Tpm3P21107 285 aaKnown RBP13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Aox4Q3TYQ9 1336 aa13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Cspp1B2RX88 1205 aa13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 AK157302I3ITR1 129 aa13.69□□□□□ -0.22
Trim11-202ENSMUST00000108809 Eif3bQ8JZQ9 803 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms