RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Cdk2ap1O35207 114 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 P01644 108 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Sin3aQ60520 1274 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Psen2Q61144 448 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Ap4e1Q80V94 1122 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Epb41l5Q8BGS1 731 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Agbl2Q8CDK2 862 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Nxf1Q99JX7 618 aaKnown RBP9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Atp1b4Q99ME6 356 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Ogfod3Q9D136 315 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Usp47Q8BY87 1376 aa9.61□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Edc4Q3UJB9 1406 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Anp32aO35381 247 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Irf1P15314 329 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Nupr2Q497P3 102 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Eif4bQ8BGD9 611 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Sap130Q8BIH0 1057 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 CgasQ8C6L5 507 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Nrxn1Q9CS84 1514 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Lrp5Q91VN0 1614 aa9.6□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Washc2Q6PGL7 1334 aa9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kcna1P16388 495 aa9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Kiaa0319Q5SZV5 1081 aa9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Shq1Q7TMX5 569 aa9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 MpstQ99J99 297 aa9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 Dhx9O70133 1380 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-202ENSMUST00000106865 PnisrA2AJT4 805 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Brd1E9PZ26 1189 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 PdgfrbP05622 1098 aa9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Pax4P32115 349 aa9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Cd63P41731 238 aa9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Aldh2P47738 519 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Sf3b2Q3UJB0 878 aaKnown RBP9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Mon1aQ6PDG8 556 aa9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Pak2Q8CIN4 524 aa9.58□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Nfat5Q9WV30 1534 aa9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Brpf3B2KF05 1204 aaKnown RBP9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Calr4Q3TQS0 420 aa9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Prdm6Q3UZD5 596 aa9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Utp3Q9JI13 469 aaKnown RBP9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Psma6Q9QUM9 246 aa9.57□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 PtpruB1AUH1 1446 aa9.56□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Tmem2Q5FWI3 1383 aa9.56□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 JunbP09450 344 aaKnown RBP9.56□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Pou2f3P31362 431 aa9.56□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Serpinb6cW4VSP4 379 aa9.56□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Rock2P70336 1388 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 FosbP13346 338 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Tbccd1Q640P7 552 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Psapl1Q8C1C1 522 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 V1ra11Q8R2E6 318 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Ivns1abpQ920Q8 642 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Mast2Q60592 1734 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Fer1l6E0CZ42 1862 aa9.55□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 P01645 108 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 MpripP97434 1024 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Smyd5Q3TYX3 416 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Q3UJC8 639 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Rhbdd1Q8BHC7 315 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Morc2bQ8C5W4 1022 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 BphlQ8R164 291 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 GneQ91WG8 722 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Fuca1Q99LJ1 452 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 SrrtQ99MR6 875 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Sept3Q9Z1S5 350 aa9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Igf2rQ07113 2483 aaKnown RBP9.54□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Zdbf2Q5SS00 2493 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Zfp735B1ARH2 734 aa9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Alx3O70137 343 aa9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Atp9bP98195 1146 aa9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Crtc2Q3U182 692 aa9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Vmn1r199Q8R280 367 aa9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Cpsf1Q9EPU4 1441 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Rock1P70335 1354 aa9.52□□□□□ -0.88
Ccdc47-202ENSMUST00000106865 Serpinb6eI7HJI3 429 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Grin2cQ01098 1239 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Pou4f2Q63934 411 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Ubp1Q811S7 540 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 NrdcQ8BHG1 1161 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Adgrg2Q8CJ12 1009 aa9.52□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Polr3aB2RXC6 1390 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Cep170bQ80U49 1574 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 CfbP04186 761 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Yy1Q00899 414 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Rsad2Q8CBB9 362 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 RhoqQ8R527 205 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 WaslQ91YD9 501 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Tex21Q9R0U9 575 aa9.51□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 SafbD3YXK2 937 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Hps5P59438 1126 aa9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Wnk4Q80UE6 1222 aa9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Amhr2Q8K592 568 aa9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Mettl16Q9CQG2 553 aaKnown RBP9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Cdhr2E9Q7P9 1308 aa9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Col16a1Q8BLX7 1580 aa9.5□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Msl3l2G3X992 371 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Vmn1r194J3JS27 296 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 CltaO08585 235 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Ppef1O35655 650 aa9.49□□□□□ -0.89
Ccdc47-202ENSMUST00000106865 Arhgap6O54834 987 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms