RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Cc2d1bQ8BRN9 848 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Lrrc59Q922Q8 307 aaKnown RBP16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 CenppQ9CZ92 286 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Igbp1bQ9QZ29 343 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Homer1Q9Z2Y3 366 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Plekhg2Q6KAU7 1340 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Terf2O35144 541 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Tacc1Q6Y685 774 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Rbm17Q8JZX4 405 aaKnown RBP16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Q9D5Q8 446 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Q4VA45 678 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Trim25Q61510 634 aaKnown RBP16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 TrhQ62361 256 aa16.41■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Cep120Q7TSG1 988 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Prl3d3A0A0M6L0J6 224 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 InhbeO08717 350 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Ddx10Q80Y44 875 aaKnown RBP16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Lmod1Q8BVA4 595 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Slc39a6Q8C145 765 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Dph6Q9CQ28 267 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Ankrd1Q9CR42 319 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Sdc2P43407 202 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Map9Q3TRR0 646 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Casp1P29452 402 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Nek11Q8C0Q4 628 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Mtmr3Q8K296 1196 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Cetn2Q9R1K9 172 aa16.4■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Kdm6aO70546 1401 aa16.39■□□□□ 0.22
Col2a1-202ENSMUST00000088355 Tbc1d5Q80XQ2 815 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ttc21aQ8C0S4 1314 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Calm1P0DP26 149 aaKnown RBP16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Calm2P0DP27 149 aaKnown RBP16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Calm3P0DP28 149 aaKnown RBP16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Slc27a3O88561 667 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Olfm5Q8BU90 496 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 DymQ8CHY3 669 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Myl6bQ8CI43 207 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Prdm11A2AGX3 565 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Brd1E9PZ26 1189 aaKnown RBP16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Dnm1P39053 867 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Itga6Q61739 1091 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pcdhb5Q91XZ5 792 aa16.39■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ktn1Q61595 1327 aaKnown RBP16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 U2af1l4Q8BGJ9 220 aa16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 ParnQ8VDG3 624 aa16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Sik1Q60670 779 aa16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Sh3d21Q7TSG5 549 aa16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Mrps27Q8BK72 415 aaKnown RBP16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ccar2Q8VDP4 922 aaKnown RBP16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Vps16Q920Q4 839 aa16.38■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Jakmip2D3YXK0 820 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Tbc1d32Q3URV1 1296 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Taok3Q8BYC6 898 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pdzd9Q9D9M4 266 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Abtb2Q7TQI7 1024 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Slx4ipQ9D7Y9 413 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Gcc2Q8CHG3 1679 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Prl3d2F6R3P9 224 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Eya2O08575 532 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ift57Q8BXG3 429 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 AdnpQ9Z103 1108 aaKnown RBP16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 KdrP35918 1367 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Trim30cD3YVI9 513 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Zscan29E9Q5B4 869 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pdia3P27773 505 aaKnown RBP16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Rnf34Q99KR6 376 aa16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pdcd6ipQ9WU78 869 aaKnown RBP16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Fam208aQ69ZR9 1610 aaKnown RBP16.37■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ncapg2Q6DFV1 1138 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Krt79Q8VED5 531 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Cfap53Q9D439 514 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Rcan3Q9JKK0 239 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 SltmQ8CH25 1031 aaKnown RBP16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Matr3Q8K310 846 aaKnown RBP16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Baiap2l1Q9DBJ3 514 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ncoa4Q5U4H9 625 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Tekt3Q6X6Z7 490 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Kif24Q6NWW5 1356 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Otud6bQ8K2H2 294 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Atg3Q9CPX6 314 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Atp10aO54827 1508 aa16.36■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pla2g4fQ50L41 855 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ano8Q6PB70 1060 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Stk36Q69ZM6 1316 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Nfxl1E9Q8I7 918 aaKnown RBP16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Rnf216P58283 853 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Tspyl3Q3UYP3 334 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Pram1Q6BCL1 675 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Cwc15Q9JHS9 229 aaKnown RBP16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Cnga2Q62398 664 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ranbp6Q8BIV3 1105 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Arhgef6Q8K4I3 771 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ube2hP62257 183 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Msl1Q6PDM1 616 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Zkscan8Q8BSL0 588 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Srgap1Q91Z69 1062 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Sil1Q9EPK6 465 aa16.35■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Paxip1Q6NZQ4 1056 aa16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Ppp1r10Q80W00 888 aaKnown RBP16.34■□□□□ 0.21
Col2a1-202ENSMUST00000088355 Znf428Q8C1M2 176 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms