RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Mettl5Q8K1A0 209 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Shtn1Q8K2Q9 631 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Tomm22Q9CPQ3 142 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Trbv21A0A0A6YX06 97 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Prkar2bP31324 416 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 S100a5P63084 93 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Gm4981Q3ULJ8 291 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 LpoQ5SW46 710 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 GnptabQ69ZN6 1235 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Wdr44Q6NVE8 915 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Ip6k2Q80V72 448 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Fam210aQ8BGY7 273 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Hgh1Q8C3I8 393 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Rec8Q8C5S7 591 aa10.84□□□□□ -0.67
Upf3b-201ENSMUST00000076265 Kcnh2O35219 1162 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Ppfibp2O35711 882 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Afap1Q80YS6 731 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 CrebzfQ91ZR3 358 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tceal1Q921P9 165 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dmrtc1Q9D9R7 182 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tpcn1Q9EQJ0 817 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Btg3P50615 252 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Gramd1bQ80TI0 738 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Rwdd1Q9CQK7 243 aa10.83□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Ercc6l2Q9JIM3 1537 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Cfap65Q3V0B4 1847 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tmem238lA0A1B0GS74 79 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Fmnl2A2APV2 1086 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Pdzrn3Q69ZS0 1063 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Utp15Q8C7V3 528 aaKnown RBP10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Slc39a3Q99K24 317 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dis3Q9CSH3 958 aaKnown RBP10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Galnt15Q9D2N8 638 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Nos1Q9Z0J4 1429 aa10.82□□□□□ -0.68
Upf3b-201ENSMUST00000076265 NcapgE9PWG6 1004 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Znf76Q8BMU0 568 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 MyripQ8K3I4 856 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Havcr2Q8VIM0 281 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Chmp4cQ9D7F7 232 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Hecw1Q8K4P8 1604 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Lekr1B2RVN1 116 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 March10E9PX79 788 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Zfp213E9QAW0 468 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Gm42641I6L9G2 585 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Soat1Q61263 540 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 AtripQ8BMG1 785 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Sf3a1Q8K4Z5 791 aaKnown RBP10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Sh3kbp1Q8R550 709 aaKnown RBP10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dennd4bQ3U1Y4 1499 aa10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Ahdc1Q6PAL7 1594 aaKnown RBP10.81□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Phox2bO35690 314 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Rasa2P58069 847 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Zfp251Q6PCX8 632 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Wdr35Q8BND3 1181 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Ces1hD3Z298 562 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 9630041A04RikD3Z3U4 205 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 ThrspQ62264 150 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Eps8l3Q91WL0 600 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Rrp7aQ9D1C9 280 aaKnown RBP10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tomm20Q9DCC8 145 aa10.8□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Magea10A2AMW4 325 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Slc27a2O35488 620 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Nat1P50294 290 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Retreg2Q6NS82 541 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Nrde2Q80XC6 1172 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dennd6aQ8BH65 605 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Ift43Q9DA69 206 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tbk1Q9WUN2 729 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Stk39Q9Z1W9 556 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tmem94Q7TSH8 1360 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Abcc5Q9R1X5 1436 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Taf4bG5E8Z2 855 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Kif3cO35066 796 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Akap10O88845 662 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dtx3lQ3UIR3 748 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Rbm20Q3UQS8 1199 aaKnown RBP10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Prpf38bQ80SY5 542 aaKnown RBP10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Nupl2Q8CIC2 420 aaKnown RBP10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Gigyf1Q99MR1 1044 aaKnown RBP10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Zbtb43Q9DAI4 467 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 IgtpQ9DCE9 423 aa10.79□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Cdc42bpgQ80UW5 1551 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Dsg2O55111 1122 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Hsd3b3P26150 373 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Top1Q04750 767 aaKnown RBP10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Clec16aQ80U30 1036 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Slc7a4Q8BLQ7 635 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Daam1Q8BPM0 1077 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Strip2Q8C9H6 844 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Klhl10Q9D5V2 608 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Smim23Q9DAL0 136 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Rab27aQ9ERI2 221 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Nckap5lQ6GQX2 1323 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Naip6Q9JIB6 1403 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Gm8926L7MUE8 181 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Abl1P00520 1123 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Kif5cP28738 956 aaKnown RBP10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Tpm2P58774 284 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Specc1Q5SXY1 1067 aa10.78□□□□□ -0.68
Upf3b-201ENSMUST00000076265 Trak2Q6P9N8 913 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms