RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Map3k2Q61083 619 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ppp1r9bQ6R891 817 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 SltmQ8CH25 1031 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Rbm33Q9CXK9 1231 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Galnt17Q7TT15 598 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Slc27a3O88561 667 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Zc3h12cQ5DTV4 884 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Larp1Q6ZQ58 1072 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Prex1Q69ZK0 1650 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Dennd3A2RT67 1274 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Wdr63B2RY71 923 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gna11P21278 359 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Pla2g4eQ50L42 875 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tfip11Q9ERA6 838 aaKnown RBP8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Stx6Q9JKK1 255 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Exoc8Q6PGF7 716 aa8.36□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Apol10bG3X9K7 334 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ppp1r10Q80W00 888 aaKnown RBP8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Nutm1Q8BHP2 1126 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ccdc122Q8BVN0 290 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ccdc121E9Q6D3 323 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Sall3Q62255 1320 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Bicdl1A0JNT9 577 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Krt18P05784 423 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Lrsam1Q80ZI6 727 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 ThemisQ8BGW0 636 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 IkQ9Z1M8 557 aaKnown RBP8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tbc1d4Q8BYJ6 1307 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Mipol1Q9D9F8 279 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Homer1Q9Z2Y3 366 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tmem94Q7TSH8 1360 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Prl3d2F6R3P9 224 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Zbtb43Q9DAI4 467 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Pkd2l2Q9JLG4 621 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kif20bQ80WE4 1774 aaKnown RBP8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cnksr1A2A9K7 700 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Mctp1E9PV86 951 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Cyp7a1Q64505 503 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Calml3Q9D6P8 149 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Fam50bQ9WTJ8 334 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ahdc1Q6PAL7 1594 aaKnown RBP8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gm21985Q6P6P5 1106 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kif1bpQ6ZPU9 617 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Nek11Q8C0Q4 628 aa8.35□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Parp14Q2EMV9 1817 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Col20a1Q923P0 1320 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Svs3aF2Z472 265 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Hvcn1Q3U2S8 269 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Atp7bQ64446 1462 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ccdc112A0AUP1 442 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tbc1d9Q3UYK3 1264 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Ddx10Q80Y44 875 aaKnown RBP8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Brd3Q8K2F0 726 aaKnown RBP8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Gtf2a1Q99PM3 378 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Kcnn1Q9EQR3 537 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Tmtc2Q56A06 836 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 P4ha1Q60715 534 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Fbxo2Q80UW2 297 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Pdia4P08003 638 aaKnown RBP8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Styxl1Q9DAR2 321 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Carmil3Q3UFQ8 1375 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 RereQ80TZ9 1558 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 NefhP19246 1090 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Msh6P54276 1358 aaKnown RBP8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Brd1E9PZ26 1189 aaKnown RBP8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Stat1P42225 749 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Chpf2Q3UU43 768 aa8.34□□□□□ -1.07
Scn3a-201ENSMUST00000066432 Abl1P00520 1123 aa8.34□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Rrs1Q9CYH6 365 aaKnown RBP8.34□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Metap2O08663 478 aaKnown RBP8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Snrpa1P57784 255 aaKnown RBP8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ncaph2Q8BSP2 607 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Atp2b3Q0VF55 1220 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ccdc83Q9D4V3 305 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Med14A2ABV5 1459 aaKnown RBP8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Scaf11E9PZM7 1456 aaKnown RBP8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Stmn4P63042 189 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Myo3aQ8K3H5 1613 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Tbc1d5Q80XQ2 815 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Slc1a4O35874 532 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Fez2Q6TYB5 348 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Olfm5Q8BU90 496 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Nucb2P81117 420 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Map3k19E9Q3S4 1311 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ptch1Q61115 1434 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Sos2Q02384 1333 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Eif4a2P10630 407 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ccdc42Q5SV66 316 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ankrd13dQ6PD24 605 aa8.33□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Trim27Q62158 513 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Txndc16Q7TN22 820 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ccdc158Q8CDI6 1109 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Zkscan7E9PVW1 718 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Ms4a1P19437 291 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Galntl5Q9D4M9 431 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Nol7Q9D7Z3 254 aaKnown RBP8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 WtapQ9ER69 396 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Lmtk3Q5XJV6 1424 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Abca9Q8K449 1623 aa8.32□□□□□ -1.08
Scn3a-201ENSMUST00000066432 Mx2Q9WVP9 655 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms