RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Il4rP16382 810 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 DesP31001 469 aaKnown RBP10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Sap30bpQ02614 308 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 ScinQ60604 715 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tsg101Q61187 391 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Atp2b4Q6Q477 1205 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Slu7Q8BHJ9 585 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Appl1Q8K3H0 707 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Supt16hQ920B9 1047 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Trak2Q6P9N8 913 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 NrrosQ8BMT4 693 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ddah1Q9CWS0 285 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Eva1cP58659 440 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Snx25Q3ZT31 840 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ppfibp1Q8C8U0 969 aaKnown RBP10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 SynpoQ8CC35 929 aaKnown RBP10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Rsph9Q9D9V4 276 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Lmnb2P21619 596 aaKnown RBP10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Lig3P97386 1015 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Etaa1Q5SVT3 877 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ccsmst1Q6RUT7 136 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ubl4bQ9CQ84 188 aa10.27□□□□□ -0.77
Clcn3-202ENSMUST00000056508 AU022751B1B0V2 589 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gm5689F6Y2A6 97 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Abtb2Q7TQI7 1024 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Brd8Q8R3B7 951 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Hmgn5Q9JL35 406 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gm35339A0A140LHH9 1649 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pfdn2O70591 154 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Caprin2Q05A80 1031 aaKnown RBP10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Krt14Q61781 484 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Txndc2Q6P902 515 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ccdc178Q8CDV0 866 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pik3caP42337 1068 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pld6Q5SWZ9 221 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pde1cQ64338 706 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Znf219Q6IQX8 726 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Afap1Q80YS6 731 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tmcc3Q8R310 477 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Psma7Q9Z2U0 248 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Olfm4Q3UZZ4 505 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ppp2r5cQ60996 524 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pex19Q8VCI5 299 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Sgsm3Q8VCZ6 750 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Oasl2Q9Z2F2 508 aa10.26□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Srpk1O70551 648 aaKnown RBP10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Lamb3Q61087 1168 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ubap1Q8BH48 502 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 KnstrnQ9D9Z1 312 aaKnown RBP10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Grm1P97772 1199 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Skiv2lQ6NZR5 1244 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 GopcQ8BH60 463 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tor4aQ8BH02 426 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ercc6lQ8BHK9 1240 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Luzp1Q8R4U7 1068 aaKnown RBP10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Mphosph6Q9D1Q1 161 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Habp4Q9JKS5 411 aaKnown RBP10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Veph1A1A535 833 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gmeb2P58929 530 aa10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gtf2f1Q3THK3 508 aaKnown RBP10.25□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Scp2P32020 547 aaKnown RBP10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Eif3j1Q3UGC7 261 aaKnown RBP10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Lrrfip1Q3UZ39 729 aaKnown RBP10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 TxlnaQ6PAM1 554 aaKnown RBP10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 FxnO35943 207 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Rad52P43352 420 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 SfswapQ3USH5 945 aaKnown RBP10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Yipf4Q8C407 246 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Prkab1Q9R078 270 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 MecomP14404 1042 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Taok3Q8BYC6 898 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 ParnQ8VDG3 624 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 IqcdQ9D3V1 458 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Rb1P13405 921 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Slc26a8Q8R0C3 999 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gps2Q921N8 327 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Syndig1A2ANU3 258 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tpm3-rs7D3Z2H9 248 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Fam129aQ3UW53 926 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gzf1Q4VBD9 706 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Q66JV7 365 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Fam161aQ8QZV6 448 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Arid3bQ9Z1N7 568 aa10.24□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Cdr1E9Q0B4 517 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 RenbpP82343 430 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ano2Q8CFW1 1002 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ap3b2Q9JME5 1082 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Hps1O08983 704 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 DnttP09838 530 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Rfc1P35601 1131 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ksr1Q61097 873 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ift57Q8BXG3 429 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Mfsd6Q8CBH5 775 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 SelenovD3YXG1 328 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 CtcfQ61164 736 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Hook1Q8BIL5 728 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Washc5Q8C2E7 1159 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Gm5591Q8CDK1 855 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Klhl41A2AUC9 606 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Flot1O08917 428 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms