Protein–RNA interactions for Protein: Q8K3H0

Appl1, DCC-interacting protein 13-alpha, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Appl1Q8K3H0 Gm25239-201ENSMUST00000174915 86 ntBASIC38.82■■■■□ 3.8
Appl1Q8K3H0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Appl1Q8K3H0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Appl1Q8K3H0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.07■■■■□ 3.04
Appl1Q8K3H0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Appl1Q8K3H0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.52■■■□□ 2.96
Appl1Q8K3H0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Appl1Q8K3H0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.28■■■□□ 2.92
Appl1Q8K3H0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Appl1Q8K3H0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
Appl1Q8K3H0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Appl1Q8K3H0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Appl1Q8K3H0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.49■■■□□ 2.79
Appl1Q8K3H0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Appl1Q8K3H0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Appl1Q8K3H0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.78■■■□□ 2.68
Appl1Q8K3H0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Appl1Q8K3H0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Appl1Q8K3H0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Appl1Q8K3H0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Appl1Q8K3H0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Appl1Q8K3H0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.3■■■□□ 2.6
Appl1Q8K3H0 Psd-208ENSMUST00000224556 2034 ntBASIC31.29■■■□□ 2.6
Appl1Q8K3H0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Appl1Q8K3H0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Appl1Q8K3H0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Appl1Q8K3H0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Appl1Q8K3H0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.06■■■□□ 2.56
Appl1Q8K3H0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.05■■■□□ 2.56
Appl1Q8K3H0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Appl1Q8K3H0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
Appl1Q8K3H0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Appl1Q8K3H0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Appl1Q8K3H0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Appl1Q8K3H0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.63■■■□□ 2.49
Appl1Q8K3H0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.58■■■□□ 2.49
Appl1Q8K3H0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.57■■■□□ 2.48
Appl1Q8K3H0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Appl1Q8K3H0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Appl1Q8K3H0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Appl1Q8K3H0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Appl1Q8K3H0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Appl1Q8K3H0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Appl1Q8K3H0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.03■■■□□ 2.4
Appl1Q8K3H0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
Appl1Q8K3H0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Appl1Q8K3H0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.97■■■□□ 2.39
Appl1Q8K3H0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Appl1Q8K3H0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.87■■■□□ 2.37
Appl1Q8K3H0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Appl1Q8K3H0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Appl1Q8K3H0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Appl1Q8K3H0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.73■■■□□ 2.35
Appl1Q8K3H0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.71■■■□□ 2.35
Appl1Q8K3H0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.63■■■□□ 2.33
Appl1Q8K3H0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
Appl1Q8K3H0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.58■■■□□ 2.33
Appl1Q8K3H0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Appl1Q8K3H0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Appl1Q8K3H0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Appl1Q8K3H0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Appl1Q8K3H0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Appl1Q8K3H0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
Appl1Q8K3H0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Appl1Q8K3H0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Appl1Q8K3H0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.3■■■□□ 2.28
Appl1Q8K3H0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.29■■■□□ 2.28
Appl1Q8K3H0 Rab21-202ENSMUST00000218831 843 ntBASIC29.27■■■□□ 2.28
Appl1Q8K3H0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Appl1Q8K3H0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Appl1Q8K3H0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Appl1Q8K3H0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Appl1Q8K3H0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Appl1Q8K3H0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.18■■■□□ 2.26
Appl1Q8K3H0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Appl1Q8K3H0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Appl1Q8K3H0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Appl1Q8K3H0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.06■■■□□ 2.24
Appl1Q8K3H0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Appl1Q8K3H0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Appl1Q8K3H0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.98■■■□□ 2.23
Appl1Q8K3H0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Appl1Q8K3H0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Appl1Q8K3H0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.84■■■□□ 2.21
Appl1Q8K3H0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Appl1Q8K3H0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Appl1Q8K3H0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.78■■■□□ 2.2
Appl1Q8K3H0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.77■■■□□ 2.2
Appl1Q8K3H0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Appl1Q8K3H0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.69■■■□□ 2.18
Appl1Q8K3H0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Appl1Q8K3H0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Appl1Q8K3H0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.67■■■□□ 2.18
Appl1Q8K3H0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Appl1Q8K3H0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Appl1Q8K3H0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Appl1Q8K3H0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Appl1Q8K3H0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.55■■■□□ 2.16
Appl1Q8K3H0 Gm26115-201ENSMUST00000175605 87 ntBASIC28.51■■■□□ 2.15
Appl1Q8K3H0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms