RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PRRG3Q9BZD7 231 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF160Q9HCG1 818 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RPRD1BQ9NQG5 326 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 FAM86C1Q9NVL1 165 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ASB6Q9NWX5 421 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 NCDNQ9UBB6 729 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ING1Q9UK53 422 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 RPH3AQ9Y2J0 694 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC6A5Q9Y345 797 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 GRIP1Q9Y3R0 1128 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 OTOGLQ3ZCN5 2332 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LINC00854A0A1B0GVQ3 168 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DAPL1A0PJW8 107 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 OR6C68A6NDL8 312 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TVP23AA6NH52 213 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CD8B2A6NJW9 211 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TMEM200CA6NKL6 621 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SNTNA6NMZ2 147 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 E9PI62 339 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF701M0R085 212 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 NTN3O00634 580 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 CDX4O14627 284 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC22A1O15245 554 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ARHGEF9O43307 516 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 STK17BO94768 372 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 NDUFB2O95178 105 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ANKRD34CP0C6C1 535 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 CD8BP10966 210 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 GP1BBP13224 206 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 HK1P19367 917 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC6A6P31641 620 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC1A3P43003 542 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 TMED1Q13445 227 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ATP1A4Q13733 1029 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DGUOKQ16854 277 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 GLYR1Q49A26 553 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 FNDC7Q5VTL7 733 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SLC6A19Q695T7 634 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 NIPAL3Q6P499 406 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LEG1Q6P5S2 330 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SPATC1Q76KD6 591 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 MEPCEQ7L2J0 689 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 RAB11FIP2Q7L804 512 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 SSX6Q7RTT6 188 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZNF367Q7RTV3 350 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ATG4DQ86TL0 474 aaPredicted RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 ATCAYQ86WG3 371 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 PHC2Q8IXK0 858 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ALDH16A1Q8IZ83 802 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LNX2Q8N448 690 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DTX3Q8N9I9 347 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DYNC2LI1Q8TCX1 351 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 BRIX1Q8TDN6 353 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 ZFAND2BQ8WV99 257 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RFKQ969G6 155 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ARL5BQ96KC2 179 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 METTL7AQ9H8H3 244 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 ICAM5Q9UMF0 924 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 DIMT1Q9UNQ2 313 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 TMEM5Q9Y2B1 443 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 LSM2Q9Y333 95 aaKnown RBP3.13□□□□□ -1.91
LIG4-205ENST00000614526 LOXL2Q9Y4K0 774 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 PCDHGA3Q9Y5H0 932 aa3.13□□□□□ -1.91
LIG4-205ENST00000614526 RALGAPA1Q6GYQ0 2036 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TMED7-TICAM2A0A0A6YYA0 188 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 KDM4EB2RXH2 506 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 ALG1L2C9J202 215 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 C9J4A7 227 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DCTN6O00399 190 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CTDSP2O14595 271 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SUSD5O60279 629 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SELENOFO60613 162 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ITGA10O75578 1167 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 KLF7O75840 302 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 NCR1O76036 304 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR7A10O76100 309 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CDRT1O95170 752 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HIST1H2ABP04908 130 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 UMODP07911 640 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MSL3P1P0C860 447 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF3P17036 446 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PSMA1P25786 263 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 HTR1FP30939 366 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 GALNSP34059 522 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 IDUAP35475 653 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RPS19P39019 145 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 PSMB10P40306 273 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CDKN2AP42771 156 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 PNLIPRP2P54317 469 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CTBP2P56545 445 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 WNT4P56705 351 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR12D2P58182 307 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DCAF7P61962 342 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RPL18Q07020 188 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.12□□□□□ -1.91
LIG4-205ENST00000614526 SLC3A1Q07837 685 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 C19orf57Q0VDD7 668 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms