RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 PGGHGQ32M88 737 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 AGBL2Q5U5Z8 902 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 PAQR6Q6TCH4 344 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 ZNF836Q6ZNA1 936 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 LSRQ86X29 649 aaPredicted RBP13.99□□□□□ -0.17
CRLF3-203ENST00000578692 GTF2H4Q92759 462 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 TMEM19Q96HH6 336 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 NPAP1Q9NZP6 1156 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 UPB1Q9UBR1 384 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 MALT1Q9UDY8 824 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 PCDHB14Q9Y5E9 798 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 MAGED1Q9Y5V3 778 aaPredicted RBP13.99□□□□□ -0.17
CRLF3-203ENST00000578692 FLVCR1Q9Y5Y0 555 aa13.99□□□□□ -0.17
CRLF3-203ENST00000578692 SHISA9B4DS77 424 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 ABCD4O14678 606 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 GPIP06744 558 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 THBS1P07996 1170 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 IDUAP35475 653 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 CDKN1AP38936 164 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 FOXG1P55316 489 aaPredicted RBP13.98□□□□□ -0.17
CRLF3-203ENST00000578692 COPZ1P61923 177 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 CEACAM7Q14002 265 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 SLC17A1Q14916 467 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 RGNQ15493 299 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 GABRA6Q16445 453 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 RPS26P11Q5JNZ5 115 aaPredicted RBP13.98□□□□□ -0.17
CRLF3-203ENST00000578692 WBP2NLQ6ICG8 309 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 OR7E24Q6IFN5 339 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 CASP12Q6UXS9 341 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 CLIP4Q8N3C7 705 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 CADM2Q8N3J6 435 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 OR52E4Q8NGH9 312 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 OR52N5Q8NH56 324 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
CRLF3-203ENST00000578692 MUS81Q96NY9 551 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 ARMC7Q9H6L4 198 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 ZNF443Q9Y2A4 671 aaPredicted RBP13.98□□□□□ -0.17
CRLF3-203ENST00000578692 SLC9A8Q9Y2E8 581 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 SLC25A15Q9Y619 301 aa13.98□□□□□ -0.17
CRLF3-203ENST00000578692 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
CRLF3-203ENST00000578692 USF3Q68DE3 2245 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 CLIC1O00299 241 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 ITGA5P08648 1049 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 BNIP2Q12982 314 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 TNK1Q13470 666 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 OR7A5Q15622 319 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 OTUD3Q5T2D3 398 aaPredicted RBP13.97□□□□□ -0.17
CRLF3-203ENST00000578692 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 SLC2A7Q6PXP3 512 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 TMEM108Q6UXF1 575 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 TMEM99Q8N816 258 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 RADILQ96JH8 1075 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 C7orf26Q96N11 449 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 PAIP1Q9H074 479 aaKnown RBP13.97□□□□□ -0.17
CRLF3-203ENST00000578692 RAD21L1Q9H4I0 556 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 ALG2Q9H553 416 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 CACYBPQ9HB71 228 aaKnown RBP13.97□□□□□ -0.17
CRLF3-203ENST00000578692 SLC7A10Q9NS82 523 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 IFT52Q9Y366 437 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 CHST2Q9Y4C5 530 aa13.97□□□□□ -0.17
CRLF3-203ENST00000578692 A0A1W2PR80 420 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 LIPT2A6NK58 231 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 A8MVM7 634 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 PDLIM1O00151 329 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 POLR3GO15318 223 aaPredicted RBP13.96□□□□□ -0.17
CRLF3-203ENST00000578692 AKR7A3O95154 331 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TGDSO95455 350 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 CD8AP01732 235 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 PRG2P13727 222 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.17
CRLF3-203ENST00000578692 PTAFRP25105 342 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 ZNF83P51522 516 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 STX1BP61266 288 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 ETFDHQ16134 617 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 CLEC12BQ2HXU8 276 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 ZNF311Q5JNZ3 666 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TSPO2Q5TGU0 170 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TMEM225Q6GV28 225 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 KLHL17Q6TDP4 642 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 LRRC8CQ8TDW0 803 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TRAF4Q9BUZ4 470 aaPredicted RBP13.96□□□□□ -0.17
CRLF3-203ENST00000578692 SF3B5Q9BWJ5 86 aaKnown RBP13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TAPBPLQ9BX59 468 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 GRIP2Q9C0E4 1043 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 BCL2L10Q9HD36 194 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 TCF7L2Q9NQB0 619 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 FAIMQ9NVQ4 179 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 MGAT4BQ9UQ53 548 aa13.96□□□□□ -0.17
CRLF3-203ENST00000578692 AQP7P3A6NL99 342 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 NUDT7P0C024 238 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 MRPL19P49406 292 aaKnown RBP13.96□□□□□ -0.18
CRLF3-203ENST00000578692 IDH3AP50213 366 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 CDH11P55287 796 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 FADDQ13158 208 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 C9orf135Q5VTT2 229 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 PRAMEF8Q5VWM4 474 aa13.96□□□□□ -0.18
CRLF3-203ENST00000578692 PRAMEF7Q5VXH5 474 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms