RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TMEM19Q96HH6 336 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 C5orf34Q96MH7 638 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 ANGPTL4Q9BY76 406 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 TBL1XR1Q9BZK7 514 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 TINAGL1Q9GZM7 467 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-213ENST00000550629 METTL7AQ9H8H3 244 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 GORASP2Q9H8Y8 452 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 ZBTB20Q9HC78 741 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-213ENST00000550629 SACM1LQ9NTJ5 587 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 ASB6Q9NWX5 421 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 ZDHHC8Q9ULC8 765 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 SLC35A3Q9Y2D2 325 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 KLF13Q9Y2Y9 288 aaPredicted RBP5.22□□□□□ -1.57
SCAF11-213ENST00000550629 DTNAQ9Y4J8 743 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 SNX13Q9Y5W8 968 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.22□□□□□ -1.57
SCAF11-213ENST00000550629 EPG5Q9HCE0 2579 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 URB1O60287 2271 aaKnown RBP5.22□□□□□ -1.57
SCAF11-213ENST00000550629 PTPRQQ9UMZ3 2332 aa5.22□□□□□ -1.57
SCAF11-213ENST00000550629 MGAQ8IWI9 3026 aa5.21□□□□□ -1.57
SCAF11-213ENST00000550629 NBEAQ8NFP9 2946 aa5.21□□□□□ -1.57
SCAF11-213ENST00000550629 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ZFHX4Q86UP3 3567 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SERINC4A6NH21 518 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 VWC2LB2RUY7 222 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 KLRC4-KLRK1H3BQV0 150 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SYT5O00445 386 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 CXCR6O00574 342 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 EIF4E2O60573 245 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 TRIM3O75382 744 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GCM2O75603 506 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 UGT2B17O75795 530 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 MFN2O95140 757 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 STAMBPO95630 424 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 OXSR1O95747 527 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SP1P08047 785 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 PF4V1P10720 104 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 IL7RP16871 459 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GGT1P19440 569 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 CNR1P21554 472 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 KDELR2P33947 212 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GAS1P54826 345 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SUMO3P55854 103 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 C17orf67Q0P5P2 114 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 RAPSNQ13702 412 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 FGFBP1Q14512 234 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 HYAL4Q2M3T9 481 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 COL28A1Q2UY09 1125 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GRAMD1BQ3KR37 738 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 LINC00303Q3SY05 128 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 LIN52Q52LA3 116 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 EIPR1Q53HC9 387 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 CCNJQ5T5M9 372 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SLC25A25Q6KCM7 469 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 RPUSD3Q6P087 351 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 DHRS4L2Q6PKH6 230 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 Q6ZS92 163 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ASB18Q6ZVZ8 466 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 MDGA2Q7Z553 956 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 IFNEQ86WN2 208 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GRAMD2AQ8IUY3 354 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF440Q8IYI8 595 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 PRR22Q8IZ63 422 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 FAM71CQ8NEG0 241 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 OR52P1PQ8NH57 321 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 GRHL3Q8TE85 626 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 LZICQ8WZA0 190 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 PNPLA2Q96AD5 504 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 TMEM41AQ96HV5 264 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 FAM173AQ9BQD7 235 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 THTPAQ9BU02 230 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 OSBPL11Q9BXB4 747 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 CADM1Q9BY67 442 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 TRIM15Q9C019 465 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 LIN28AQ9H9Z2 209 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 EXOSC3Q9NQT5 275 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 OLAHQ9NV23 265 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ADPRHL2Q9NX46 363 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 ACTR3BQ9P1U1 418 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SEC14L3Q9UDX4 400 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 RPS6KA6Q9UK32 745 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 BAG5Q9UL15 447 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 MKLN1Q9UL63 735 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 SAMD4AQ9UPU9 718 aaKnown RBP5.21□□□□□ -1.58
SCAF11-213ENST00000550629 B3GNT3Q9Y2A9 372 aa5.21□□□□□ -1.58
SCAF11-213ENST00000550629 CPAMD8Q8IZJ3 1885 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 SCN2AQ99250 2005 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 CCDC88CQ9P219 2028 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 hCG_2014768A0A024R1R8 64 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 A0A087WZY1 265 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 CFAP73A6NFT4 308 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 LRRC3CA6NJW4 275 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 AQP12BA6NM10 295 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 M0QX08 132 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 FAAHO00519 579 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 ADAM10O14672 748 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 ACOT8O14734 319 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 ARPC2O15144 300 aa5.2□□□□□ -1.58
SCAF11-213ENST00000550629 ZNF264O43296 627 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms