RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 IGHV3-9P01782 118 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 TROVE2P10155 538 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 SLC6A2P23975 617 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 IL32P24001 234 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 AQP1P29972 269 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 PRKAR1BP31321 381 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 IDUAP35475 653 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 SLC16A1P53985 500 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 MTPNP58546 118 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 GUCY1A3Q02108 690 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 OR7A5Q15622 319 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 DEFB113Q30KQ7 82 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 BEX5Q5H9J7 111 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 BHLHA15Q7RTS1 189 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 ATG4DQ86TL0 474 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 PTOV1Q86YD1 416 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 KISS1RQ969F8 398 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 SLC35B4Q969S0 331 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 ANKRD27Q96NW4 1050 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 ALPK1Q96QP1 1244 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 NAA11Q9BSU3 229 aaPredicted RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 A8MVM7 634 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 FBP2O00757 339 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 GPR171O14626 319 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 NPIPB7O75200 414 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 AKR7A3O95154 331 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
HDAC1-209ENST00000484305 PLAUP00749 431 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 GPIP06744 558 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 VIMP08670 466 aaKnown RBP11.4□□□□□ -0.58
HDAC1-209ENST00000484305 IGHV1-2P23083 117 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 ARFIP2P53365 341 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 NFYCQ13952 458 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 CAPRIN1Q14444 709 aaKnown RBP11.4□□□□□ -0.58
HDAC1-209ENST00000484305 SLC17A1Q14916 467 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 TAB1Q15750 504 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 OTUD3Q5T2D3 398 aaPredicted RBP11.4□□□□□ -0.58
HDAC1-209ENST00000484305 FBXW9Q5XUX1 488 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 DHRS4L2Q6PKH6 230 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 KRT73Q86Y46 540 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 TMEM99Q8N816 258 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 HIPK4Q8NE63 616 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 APH1AQ96BI3 265 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 WFDC6Q9BQY6 131 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 SPATA5L1Q9BVQ7 753 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 UBTD1Q9HAC8 227 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.58
HDAC1-209ENST00000484305 CADP27708 2225 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 AQP7P3A6NL99 342 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 MRPL33O75394 65 aaKnown RBP11.39□□□□□ -0.59
HDAC1-209ENST00000484305 MFN2O95140 757 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 COX5AP20674 150 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 HTR2AP28223 471 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 EGR4Q05215 589 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 DMTNQ08495 405 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ACKR1Q16570 336 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 CYP51A1Q16850 503 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 HSP90B2PQ58FF3 399 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 C1orf140Q5VVS0 124 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 SEZ6L2Q6UXD5 910 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 UBE2J2Q8N2K1 259 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF433Q8N7K0 673 aaPredicted RBP11.39□□□□□ -0.59
HDAC1-209ENST00000484305 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 STK35Q8TDR2 534 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 HSD17B8Q92506 261 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF607Q96SK3 696 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 TMEM204Q9BSN7 226 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 KAT8Q9H7Z6 458 aaKnown RBP11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ADPRHL2Q9NX46 363 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 RPS6KB2Q9UBS0 482 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ANGPT4Q9Y264 503 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 ARID1AO14497 2285 aa11.39□□□□□ -0.59
HDAC1-209ENST00000484305 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 PRORSD1PA6NEY8 169 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ELOA3DA6NLF2 546 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 TPST2O60704 377 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 SERPINB7O75635 380 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 RPS5P46782 204 aaKnown RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 GZMMP51124 257 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 P2RY4P51582 365 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 NR1H2P55055 460 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 FOXG1P55316 489 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 PCBP3P57721 371 aaKnown RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ADAM8P78325 824 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 KLF10Q13118 480 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 STK11Q15831 433 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ELOA3BQ3SY89 546 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 CASP12Q6UXS9 341 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF704Q6ZNC4 412 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 NET1Q7Z628 596 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 TGIF2LYQ8IUE0 185 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 LSMEM1Q8N8F7 131 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ZIC4Q8N9L1 334 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 SMYD1Q8NB12 490 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms