RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 KRT33AO76009 404 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 TOX4O94842 621 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 NUDT14O95848 222 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 FAM228BP0C875 321 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 BCKDHAP12694 445 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF26P17031 533 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 GTF2E2P29084 291 aaKnown RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 EPHA3P29320 983 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ARR3P36575 388 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 CASP2P42575 452 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ASMTP46597 345 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 SELENOVP59797 346 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 PSG6Q00889 435 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 CD83Q01151 205 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 GALK2Q01415 458 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 COX10Q12887 443 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 SELENBP1Q13228 472 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ZMYND11Q15326 602 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 LY6EQ16553 131 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ERCC6LQ2NKX8 1250 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 PAGE2BQ5JRK9 111 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF774Q6NX45 483 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 MTDHQ86UE4 582 aaKnown RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 MDP1Q86V88 176 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 LRRC28Q86X40 367 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 CCDC103Q8IW40 242 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ZBED8Q8IZ13 594 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 OR5R1Q8NH85 324 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 B4GALNT2Q8NHY0 566 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 WDR34Q96EX3 536 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 MS4A3Q96HJ5 214 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 ERGIC2Q96RQ1 377 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 NKX3-1Q99801 234 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 FRMD8P1Q9BZ68 369 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 SERHL2Q9H4I8 314 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 XAB2Q9HCS7 855 aaKnown RBP5.38□□□□□ -1.55
HDAC3-206ENST00000471968 DSPPQ9NZW4 1301 aa5.38□□□□□ -1.55
HDAC3-206ENST00000471968 TCRBV4S1A1TA0A5B7 111 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ERI2A8K979 691 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 SPRY3O43610 288 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 SPOPO43791 374 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 WNT2P09544 360 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 H2AFZP0C0S5 128 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 OR8G3PP0DMU2 310 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 RPS2P15880 293 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 CSNK2A2P19784 350 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 FSTP19883 344 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 BSGP35613 385 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 CAPZA2P47755 286 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 LUMP51884 338 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 SLC16A1P53985 500 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 KLF3P57682 345 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 BTG1P62324 171 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 CSNK2A1P68400 391 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 TIAL1Q01085 375 aaKnown RBP eCLIP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 GLO1Q04760 184 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 TRAF3Q13114 568 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 THOC5Q13769 683 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 PDE7AQ13946 482 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 FXNQ16595 210 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 TRMT5Q32P41 509 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ARSJQ5FYB0 599 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 STEAP4Q687X5 459 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 H2AFVQ71UI9 128 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ABHD12BQ7Z5M8 362 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 Q8N1X5 172 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 SCAIQ8N9R8 606 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 POMGNT2Q8NAT1 580 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 PIGXQ8TBF5 258 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 MAGEE2Q8TD90 523 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 CTNNBL1Q8WYA6 563 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 AURKBQ96GD4 344 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF317Q96PQ6 595 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ALKBH3Q96Q83 286 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 CAPS2Q9BXY5 557 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 NELFAQ9H3P2 528 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 RMND5AQ9H871 391 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 DDX31Q9H8H2 851 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ETNK1Q9HBU6 452 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 NOP53Q9NZM5 478 aaKnown RBP5.37□□□□□ -1.55
HDAC3-206ENST00000471968 FBXO5Q9UKT4 447 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 SLC9A8Q9Y2E8 581 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 PCDHA9Q9Y5H5 950 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 FLVCR1Q9Y5Y0 555 aa5.37□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF587BE7ETH6 402 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 H3BUX3 64 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 LY86O95711 162 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MT-ND5P03915 603 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF35P13682 527 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 MMP9P14780 707 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 RYKP34925 604 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 HNMTP50135 292 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF81P51508 661 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 PSMD4P55036 377 aaKnown RBP5.36□□□□□ -1.55
HDAC3-206ENST00000471968 IL2P60568 153 aa5.36□□□□□ -1.55
HDAC3-206ENST00000471968 IRF8Q02556 426 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms