RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ST8SIA3O43173 380 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 RANBP6O60518 1105 aaKnown RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 FLOT1O75955 427 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 CXCL14O95715 111 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 GAS8O95995 478 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 GH1P01241 217 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 RNASE2P10153 161 aaKnown RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 THRBP10828 461 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 IGLL1P15814 213 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 NTSP30990 170 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 KIR2DS2P43631 304 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ATXN3P54252 364 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 DEFA6Q01524 100 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 KLRC3Q07444 240 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 SCN1BQ07699 218 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 TFCP2Q12800 502 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 AANATQ16613 207 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 MAPK6Q16659 721 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF57Q68EA5 555 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 SPNS3Q6ZMD2 512 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 NUP93Q8N1F7 819 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 PYROXD2Q8N2H3 581 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 C6orf223Q8N319 242 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 COLGALT1Q8NBJ5 622 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 UXS1Q8NBZ7 420 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 OR51G1Q8NGK1 321 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ITFG1Q8TB96 612 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 SLC22A8Q8TCC7 542 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 RLN3Q8WXF3 142 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ING5Q8WYH8 240 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 FAM3CQ92520 227 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 NRGNQ92686 78 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 CORO2AQ92828 525 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 CNDP2Q96KP4 475 aaKnown RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 TESK2Q96S53 571 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF2Q9BSG1 426 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 CWH43Q9H720 699 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 PNPLA3Q9NST1 481 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 ANKEF1Q9NU02 776 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 DDX28Q9NUL7 540 aaKnown RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 RBAKQ9NYW8 714 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 EPS15L1Q9UBC2 864 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 OPN4Q9UHM6 478 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 NSD1Q96L73 2696 aaPredicted RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 MXRA5Q9NR99 2828 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 PCM1Q15154 2024 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 AKAP6Q13023 2319 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 KNL1Q8NG31 2342 aa0.94□□□□□ -2.26
LRCH3-209ENST00000452660 TNRC6AQ8NDV7 1962 aaKnown RBP0.94□□□□□ -2.26
LRCH3-209ENST00000452660 RNF213Q63HN8 5207 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 DYSFO75923 2080 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SEC16AO15027 2179 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF106Q9H2Y7 1883 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 DOCK5Q9H7D0 1870 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TENM1Q9UKZ4 2725 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ABCA4P78363 2273 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 LRIT2A6NDA9 550 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 A8MUA0 341 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 K7EM74 188 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 RHOBTB1O94844 696 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ANP32DO95626 131 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 CD55P08174 381 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 PNMTP11086 282 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF14P17017 642 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 U2AF2P26368 475 aaKnown RBP eCLIP0.93□□□□□ -2.264e-10■■■■□ 21.6
LRCH3-209ENST00000452660 CD52P31358 61 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ACADSBP45954 432 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 CRYBB1P53674 252 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SNAP25P60880 206 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 DNAJC3Q13217 504 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 EXOSC7Q15024 291 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 PON2Q15165 354 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TAF7Q15545 349 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TCHHL1Q5QJ38 904 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 CASC10Q5T4H9 136 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 HES3Q5TGS1 186 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 SLC25A34Q6PIV7 304 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 KDM7AQ6ZMT4 941 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 HSD11B1LQ7Z5J1 315 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 METTL23Q86XA0 190 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 CALHM3Q86XJ0 350 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 CERS3Q8IU89 383 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MRPL43Q8N983 215 aaKnown RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 Q8NFD4 153 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 OR2A12Q8NGT7 310 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 OR52J3Q8NH60 311 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 HTR3CQ8WXA8 447 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ZNF707Q96C28 371 aaPredicted RBP0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TMEM80Q96HE8 168 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 C12orf42Q96LP6 360 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ACCSQ96QU6 501 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TSPAN18Q96SJ8 248 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 COQ7Q99807 217 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 FUT8Q9BYC5 575 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 ACPTQ9BZG2 426 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 TMEM245Q9H330 911 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 NARFLQ9H6Q4 476 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MAGEF1Q9HAY2 307 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 LHX9Q9NQ69 397 aa0.93□□□□□ -2.26
LRCH3-209ENST00000452660 MEPEQ9NQ76 525 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 328.9 ms