RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 PAICSP22234 425 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 HCCSP53701 268 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TMEM44Q2T9K0 475 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TOR2AQ5JU69 321 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 CBLN3Q6UW01 205 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 RPTNQ6XPR3 784 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TMPRSS11AQ6ZMR5 421 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TMEM91Q6ZNR0 172 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 MED25Q71SY5 747 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 MARCH9Q86YJ5 346 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 CDK20Q8IZL9 346 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 OR52N1Q8NH53 320 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNRF4Q8WWF5 429 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 PMM1Q92871 262 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 SENP5Q96HI0 755 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TEAD3Q99594 435 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 TRIM2Q9C040 744 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 NRSN2Q9GZP1 204 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 NXF5Q9H1B4 397 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 ADGRL4Q9HBW9 690 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 CUTCQ9NTM9 273 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 CMAHPQ9Y471 501 aa13.92□□□□□ -0.18
SCAMP4-202ENST00000409472 GMFGO60234 142 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 HCN1O60741 890 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 CFL1P23528 166 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 HNRNPKP61978 463 aaKnown RBP eCLIP13.91□□□□□ -0.181e-9■□□□□ 10.2
SCAMP4-202ENST00000409472 SKP1P63208 163 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 RUNX1T1Q06455 604 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 NR2C2APQ86WQ0 139 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC35F3Q8IY50 421 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OR8H2Q8N162 312 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 ACBD7Q8N6N7 88 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 CADM4Q8NFZ8 388 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OR5M3Q8NGP4 307 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OR4K13Q8NH42 304 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OR1L3Q8NH93 324 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 LHFPL5Q8TAF8 219 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 FAM174AQ8TBP5 190 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OR8D2Q9GZM6 311 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 PPIL3Q9H2H8 161 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 CHRDQ9H2X0 955 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 TIGARQ9NQ88 270 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 FBXL21Q9UKT6 434 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 ADAMTS20P59510 1910 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 IGHV1OR21-1A0A087WYE8 117 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 LINC00854A0A1B0GVQ3 168 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 CDC14CA4D256 554 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 TRIM77I1YAP6 450 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 MST1P26927 711 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 UQCRC1P31930 480 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 FAM27D1Q5T7N8 215 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 PTCRAQ6ISU1 281 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC25A45Q8N413 288 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC7A6Q92536 515 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 C3orf49Q96BT1 292 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 ERMAPQ96PL5 475 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 SRRQ9GZT4 340 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNF304Q9HCX3 659 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 GMEB2Q9UKD1 530 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC35A3Q9Y2D2 325 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 PCDHGB2Q9Y5G2 931 aa13.91□□□□□ -0.18
SCAMP4-202ENST00000409472 IGKV1D-42A0A075B6H8 117 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 TRDV1A0A1B0GX56 115 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 RIIAD1A6NNX1 92 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 MEN1O00255 615 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 SOX1O00570 391 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 PSKH1P11801 424 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 FOLR1P15328 257 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 HIST1H1CP16403 213 aaKnown RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 ATF4P18848 351 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 FGF9P31371 208 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 SLC37A1P57057 533 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 B2MP61769 119 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 E2F1Q01094 437 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 ZNF85Q03923 595 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 GRM7Q14831 915 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 VWA2Q5GFL6 755 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 ULK3Q6PHR2 472 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 LYPD4Q6UWN0 246 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 LIX1LQ8IVB5 337 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 C17orf47Q8NEP4 570 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 OR52E2Q8NGJ4 325 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 MESP1Q9BRJ9 268 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 G6PC3Q9BUM1 346 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 JAM3Q9BX67 310 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 B3GNT2Q9NY97 397 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 DAPL1A0PJW8 107 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 MEIOCA2RUB1 952 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 LEUTXA8MZ59 168 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 H0YIG0 161 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 CASKO14936 926 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 WISP1O95388 367 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 GIMD1P0DJR0 217 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 CCR4P51679 360 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 242.2 ms