RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 FAM183AA6NL82 134 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 GNB5O14775 395 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 ZNF264O43296 627 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 ICOSLGO75144 302 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 CELA2AP08217 269 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 SERPINB10P48595 397 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 FOXK2Q01167 660 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 WBP2NLQ6ICG8 309 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 SHFQ7M4L6 423 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 ADCK1Q86TW2 530 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 GID4Q8IVV7 300 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 BORCS5Q969J3 196 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 CCNL2Q96S94 520 aaPredicted RBP20.61■□□□□ 0.89
CDX1-201ENST00000231656 RNF167Q9H6Y7 350 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 MMP25Q9NPA2 562 aa20.61■□□□□ 0.89
CDX1-201ENST00000231656 REM1O75628 298 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 LIMS3P0CW19 117 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 LIMS4P0CW20 117 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 PSPHP78330 225 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 PLCXD2Q0VAA5 305 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 TIMM50Q3ZCQ8 353 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 SLC35F1Q5T1Q4 408 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 NIPAL3Q6P499 406 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 PLBD1Q6P4A8 553 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 CBLN3Q6UW01 205 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 CROCCP3Q8IVE0 287 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 SLC15A4Q8N697 577 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 KBTBD8Q8NFY9 601 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 SGTBQ96EQ0 304 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 SH3YL1Q96HL8 342 aaPredicted RBP20.6■□□□□ 0.89
CDX1-201ENST00000231656 DACH2Q96NX9 599 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 DEFB126Q9BYW3 111 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 FBXL4Q9UKA2 621 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 BAIAP2Q9UQB8 552 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 EXPH5Q8NEV8 1989 aa20.6■□□□□ 0.89
CDX1-201ENST00000231656 GPX5O75715 221 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 LIPCP11150 499 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 IL12BP29460 328 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 WNT4P56705 351 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 NRG3P56975 720 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDX1-201ENST00000231656 ZNF362Q5T0B9 420 aaPredicted RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 RTL4Q6ZR62 310 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 OR4F15Q8NGB8 312 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 OMA1Q96E52 524 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 RTN4RQ9BZR6 473 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 NDUFB11Q9NX14 153 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 CHCHD3Q9NX63 227 aaKnown RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 P4HTMQ9NXG6 502 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 H2AFY2Q9P0M6 372 aaPredicted RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 MYOTQ9UBF9 498 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 IGKV1D-42A0A075B6H8 117 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 GTPBP1O00178 669 aaKnown RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 MASP2O00187 686 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 WWP2O00308 870 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 ZNF354AO60765 605 aaPredicted RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 PPP1R3DO95685 299 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 IGHA1P01876 353 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 SLC6A6P31641 620 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 ATG4DQ86TL0 474 aaPredicted RBP20.59■□□□□ 0.89
CDX1-201ENST00000231656 ADAMTS17Q8TE56 1095 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 DTNBP1Q96EV8 351 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 JAM3Q9BX67 310 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 SLC19A3Q9BZV2 496 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 LAT2Q9GZY6 243 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 MED20Q9H944 212 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 AKIP1Q9NQ31 210 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 AKAP13Q12802 2813 aa20.59■□□□□ 0.89
CDX1-201ENST00000231656 PIEZO1Q92508 2521 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 J3QRE1 110 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 PPM1BO75688 479 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 HPP00738 406 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 MST1P26927 711 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 RPS3AP61247 264 aaKnown RBP20.58■□□□□ 0.89
CDX1-201ENST00000231656 OR2G6Q5TZ20 316 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 RAB43Q86YS6 212 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 ZNF485Q8NCK3 441 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 OR6Q1Q8NGQ2 317 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 KIAA1143Q96AT1 154 aaPredicted RBP20.58■□□□□ 0.89
CDX1-201ENST00000231656 ZNF524Q96C55 264 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 ZNF649Q9BS31 505 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 HCAR1Q9BXC0 346 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 ISYNA1Q9NPH2 558 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 CORINQ9Y5Q5 1042 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 NPFFR2Q9Y5X5 522 aa20.58■□□□□ 0.89
CDX1-201ENST00000231656 MPDZO75970 2070 aa20.58■□□□□ 0.88
CDX1-201ENST00000231656 A0A1W2PQD3 144 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 TRABD2BA6NFA1 517 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 METTL15A6NJ78 407 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 PNMTP11086 282 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 CPEP16870 476 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 SLC1A3P43003 542 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 SLC9A3P48764 834 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 CCR4P51679 360 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 PNLIPRP2P54317 469 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 MEPCEQ7L2J0 689 aaKnown RBP20.57■□□□□ 0.88
CDX1-201ENST00000231656 PHC2Q8IXK0 858 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 TMCO5AQ8N6Q1 288 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 KLHDC3Q9BQ90 382 aa20.57■□□□□ 0.88
CDX1-201ENST00000231656 SEC14L4Q9UDX3 406 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms