RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 UGT3A1Q6NUS8 523 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CCDC137Q6PK04 289 aaKnown RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 XKRXQ6PP77 449 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 C16orf47Q6ZP98 133 aaPredicted RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TMPRSS11BQ86T26 416 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 DOLPP1Q86YN1 238 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CA13Q8N1Q1 262 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC5A8Q8N695 610 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 ARFGAP2Q8N6H7 521 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PLPP5Q8NEB5 264 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TRIM58Q8NG06 486 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 OR52N2Q8NGI0 321 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC22A8Q8TCC7 542 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PHF10Q8WUB8 498 aaKnown RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 MAIP1Q8WWC4 291 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 FBXL8Q96CD0 374 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 LRRC39Q96DD0 335 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CERS2Q96G23 380 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SMIM10Q96HG1 83 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PDLIM2Q96JY6 352 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 GPR78Q96P69 363 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SNX18Q96RF0 628 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 NEU1Q99519 415 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 LPAR4Q99677 370 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SIKE1Q9BRV8 207 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 IFT27Q9BW83 186 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 KLHL31Q9H511 634 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PARVBQ9HBI1 364 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 DEPPQ9NTK1 212 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 SIRT5Q9NXA8 310 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 QPCTLQ9NXS2 382 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 STMN3Q9NZ72 180 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PPP2R2CQ9Y2T4 447 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 MAD1L1Q9Y6D9 718 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 PMF1-BGLAPU3KQ54 211 aa4.39□□□□□ -1.71
GAPLINC-202ENST00000579007 TRBV11-1A0A0K0K1C0 115 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 A0A1B0GTH9 108 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 NKX2-6A6NCS4 301 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 FAM90A10PA6NDY2 464 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 A8MUA0 341 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 PGRMC1O00264 195 aaKnown RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CDC7O00311 574 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CES2O00748 559 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC16A5O15375 505 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 OR1F1O43749 312 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CIDEAO60543 219 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 ZNF354AO60765 605 aaPredicted RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 MYO1DO94832 1006 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 OR6A2O95222 327 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 GPANK1O95872 356 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 IGLV1-40P01703 118 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SERPIND1P05546 499 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 ADH4P08319 380 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CD8BP10966 210 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 ABOP16442 354 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CD22P20273 847 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 HRH2P25021 359 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 IVDP26440 423 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CERS1P27544 350 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 HTR2AP28223 471 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 GMPRP36959 345 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 MAGEB1P43366 347 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 FNTAP49354 379 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 RGS4P49798 205 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CCR8P51685 355 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SUCLG1P53597 346 aaKnown RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 AP1S2P56377 157 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 OC90Q02509 493 aaPredicted RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 TLE4Q04727 773 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC18A2Q05940 514 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 GAB1Q13480 694 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 PNLIPRP3Q17RR3 467 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CD300EQ496F6 205 aaPredicted RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 LBHQ53QV2 105 aaPredicted RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 TEDDM1Q5T9Z0 273 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 HECTD2Q5U5R9 776 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 STEAP4Q687X5 459 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 NCR3LG1Q68D85 454 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 DUPD1Q68J44 220 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC25A25Q6KCM7 469 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 PRR27Q6MZM9 219 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 LRRC8EQ6NSJ5 796 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 HAPLN4Q86UW8 402 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 RPS19BP1Q86WX3 136 aaKnown RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 MISPQ8IVT2 679 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CADM3Q8N126 398 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 CYP4Z2PQ8N1L4 340 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 SLC35F6Q8N357 371 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 ZNF611Q8N823 705 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 FAM47BQ8NA70 645 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 ZFP62Q8NB50 900 aaPredicted RBP4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 LILRB4Q8NHJ6 448 aa4.38□□□□□ -1.71
GAPLINC-202ENST00000579007 HUS1BQ8NHY5 278 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms