RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CA14Q9ULX7 337 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SURF4O15260 269 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FRS3O43559 492 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HLA-AP01891 365 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SERPINA2P20848 420 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 NFYAP23511 347 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ETV6P41212 452 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FOLR3P41439 243 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 THBS3P49746 956 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FOXA1P55317 472 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RAP2BP61225 183 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 MLLT11Q13015 90 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SLC22A6Q4U2R8 563 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SFRP5Q5T4F7 317 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 B3GNT8Q7Z7M8 397 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 GLB1L2Q8IW92 636 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ADGRG5Q8IZF4 528 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CHST14Q8NCH0 376 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PITHD1Q9GZP4 211 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 MCTS1Q9ULC4 181 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SCML1Q9UN30 329 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 LTN1O94822 1766 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM72A0PK05 275 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CDHR4A6H8M9 788 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF891A8MT65 544 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HIDE1A8MVS5 230 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 TFAP2AP05549 437 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RAB40ALP0C0E4 278 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SLC1A3P43003 542 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 IRF4Q15306 451 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 STEAP3Q658P3 488 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 KDELC1Q6UW63 502 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 DLK2Q6UY11 383 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FBXW12Q6X9E4 464 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PDZD3Q86UT5 571 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SIAH1Q8IUQ4 282 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 FAM58AQ8N1B3 248 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 OR5L1Q8NGL2 311 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 OR6T1Q8NGN1 323 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RAB40AQ8WXH6 277 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RSPRY1Q96DX4 576 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SLC19A3Q9BZV2 496 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF443Q9Y2A4 671 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PUS1Q9Y606 427 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SGK494L7N484 410 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CIDEAO60543 219 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RDH16O75452 317 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ACPPP15309 386 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 KITLGP21583 273 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 HNRNPA2B1P22626 353 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 TSFMP43897 325 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 PPT1P50897 306 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 TAS2R46P59540 309 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SORDQ00796 357 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 MSMO1Q15800 293 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF322Q6U7Q0 402 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 RANBP10Q6VN20 620 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 MEX3DQ86XN8 651 aaKnown RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CBARPQ8N350 705 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CASD1Q96PB1 797 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 CCNL2Q96S94 520 aaPredicted RBP9.31□□□□□ -0.92
COL4A6-208ENST00000538570 EHFQ9NZC4 300 aa9.31□□□□□ -0.92
COL4A6-208ENST00000538570 SDC3O75056 442 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ITGB2P05107 769 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 S100A7P31151 101 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 RPS18P62269 152 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 CLINT1Q14677 625 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 PM20D1Q6GTS8 502 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 WDR74Q6RFH5 385 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 SLC51BQ86UW2 128 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 RAB39BQ96DA2 213 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MAP6Q96JE9 813 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 A0A0D9SG52 128 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MROH6A6NGR9 719 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF623O75123 536 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 IL1AP01583 271 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 HOXB5P09067 269 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MMP12P39900 470 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 PTTG1IPP53801 180 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ATP1B3P54709 279 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 COL9A2Q14055 689 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 OR10K2Q6IF99 312 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 APOOLQ6UXV4 268 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 FAM122BQ7Z309 247 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MKXQ8IYA7 352 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ASB17Q8WXJ9 295 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 RBMXL1Q96E39 390 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 OR51B6Q9H340 312 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 BABAM2Q9NXR7 383 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 VAPAQ9P0L0 249 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ARAFP10398 606 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ACP2P11117 423 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 RACK1P63244 317 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MPEG1Q2M385 716 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 HYAL4Q2M3T9 481 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms