RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 ZNF440Q8IYI8 595 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 OR6T1Q8NGN1 323 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 VANGL1Q8TAA9 524 aaPredicted RBP18.9■□□□□ 0.62
PKP3-205ENST00000527442 PHOSPHO1Q8TCT1 267 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 WFDC6Q9BQY6 131 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 AMBRA1Q9C0C7 1298 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 DCLRE1BQ9H816 532 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 METTL7AQ9H8H3 244 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 ACKR4Q9NPB9 350 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 KLRF1Q9NZS2 232 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 TESQ9UGI8 421 aaKnown RBP18.9■□□□□ 0.62
PKP3-205ENST00000527442 WIF1Q9Y5W5 379 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 ENPP4Q9Y6X5 453 aa18.9■□□□□ 0.62
PKP3-205ENST00000527442 IGLV3-32A0A0A0MS00 114 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 EIF4E2O60573 245 aaKnown RBP18.89■□□□□ 0.61
PKP3-205ENST00000527442 FMO6PO60774 539 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 EPXP11678 715 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 ITGA2P17301 1181 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 RNF144AP50876 292 aaPredicted RBP18.89■□□□□ 0.61
PKP3-205ENST00000527442 RCN1Q15293 331 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 NPTX1Q15818 432 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 CLEC9AQ6UXN8 241 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 ZNF550Q7Z398 422 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 MARCH3Q86UD3 253 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 GATSQ8NAP1 163 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 TOR1AIP2Q8NFQ8 470 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 ARSGQ96EG1 525 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 ZNF300Q96RE9 604 aaPredicted RBP18.89■□□□□ 0.61
PKP3-205ENST00000527442 ANGPTL4Q9BY76 406 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 LAT2Q9GZY6 243 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 NDUFAF4Q9P032 175 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 FOXD3Q9UJU5 478 aaPredicted RBP18.89■□□□□ 0.61
PKP3-205ENST00000527442 DOCK7Q96N67 2140 aa18.89■□□□□ 0.61
PKP3-205ENST00000527442 JMJD1CQ15652 2540 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 TUBAL3A6NHL2 446 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 hCG_2039718K7EN88 272 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 FRS3O43559 492 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 TIPRLO75663 272 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 MT-ND1P03886 318 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 UBTFL6P0CB48 400 aaPredicted RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 ZNF117Q03924 483 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 CRYZQ08257 329 aaKnown RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 C17orf67Q0P5P2 114 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 BICRALQ6AI39 1079 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 LINC01560Q8TB33 94 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 JSRP1Q96MG2 331 aaPredicted RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 ZNF347Q96SE7 839 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 POLR2J2Q9GZM3 115 aaKnown RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 POLR2J3Q9H1A7 115 aaKnown RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 SDHAF3Q9NRP4 125 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 QPCTLQ9NXS2 382 aa18.88■□□□□ 0.61
PKP3-205ENST00000527442 ZNF629Q9UEG4 869 aaPredicted RBP18.88■□□□□ 0.61
PKP3-205ENST00000527442 FAAHO00519 579 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 OIP5O43482 229 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 RHCEP18577 417 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 SUMO3P55854 103 aaPredicted RBP18.87■□□□□ 0.61
PKP3-205ENST00000527442 EPS8Q12929 822 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 ATP6AP1Q15904 470 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 NDUFAF6Q330K2 333 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 RANBP3LQ86VV4 465 aaPredicted RBP18.87■□□□□ 0.61
PKP3-205ENST00000527442 RBM45Q8IUH3 476 aaKnown RBP18.87■□□□□ 0.61
PKP3-205ENST00000527442 PQLC1Q8N2U9 271 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 PRRC1Q96M27 445 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 RNPEPL1Q9HAU8 725 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 GALNT9Q9HCQ5 603 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 STX18Q9P2W9 335 aaKnown RBP18.87■□□□□ 0.61
PKP3-205ENST00000527442 ICAM5Q9UMF0 924 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 CARD8Q9Y2G2 431 aa18.87■□□□□ 0.61
PKP3-205ENST00000527442 CLCA1A8K7I4 914 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 AHRRA9YTQ3 701 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 H0Y3Z8 333 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 GTPBP1O00178 669 aaKnown RBP18.86■□□□□ 0.61
PKP3-205ENST00000527442 AP3D1O14617 1153 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 TPST2O60704 377 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 ADAM11O75078 769 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 DEAF1O75398 565 aaPredicted RBP18.86■□□□□ 0.61
PKP3-205ENST00000527442 PRSS23O95084 383 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 HEXAP06865 529 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 PRG2P13727 222 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 CD53P19397 219 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 FASP25445 335 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 GDF1P27539 372 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 TIMP3P35625 211 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 ACAA2P42765 397 aaKnown RBP18.86■□□□□ 0.61
PKP3-205ENST00000527442 SLC6A8P48029 635 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 POU4F3Q15319 338 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 CBLN3Q6UW01 205 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 DEF8Q6ZN54 512 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 PRIMA1Q86XR5 153 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 LILRA2Q8N149 483 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 TMEM41AQ96HV5 264 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 PPP4R1LQ9P1A2 415 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 RIMS3Q9UJD0 308 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
PKP3-205ENST00000527442 A0A1W2PPR1 153 aa18.85■□□□□ 0.61
PKP3-205ENST00000527442 HCRTR2O43614 444 aa18.85■□□□□ 0.61
PKP3-205ENST00000527442 SNX4O95219 450 aa18.85■□□□□ 0.61
PKP3-205ENST00000527442 ATP6V1G2O95670 118 aa18.85■□□□□ 0.61
PKP3-205ENST00000527442 IL2RAP01589 272 aa18.85■□□□□ 0.61
PKP3-205ENST00000527442 GKN3PP0CG01 181 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms