RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 C10orf107Q8IVU9 208 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 C9orf40Q8IXQ3 194 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 METTL4Q8N3J2 472 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 MARVELD2Q8N4S9 558 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 GBP7Q8N8V2 638 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 OR5L2Q8NGL0 311 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NUBPLQ8TB37 319 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM57AQ8TBR7 257 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 METTL6Q8TCB7 284 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ADAMTS15Q8TE58 950 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 AGAP11Q8TF27 550 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PHF10Q8WUB8 498 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TANKQ92844 425 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 UCN3Q969E3 161 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ATP6V1E2Q96A05 226 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PPWD1Q96BP3 646 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TM4SF18Q96CE8 201 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TLCD1Q96CP7 247 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 RBM18Q96H35 190 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SENP5Q96HI0 755 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 MARK4Q96L34 752 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM111AQ96PZ2 611 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SMC6Q96SB8 1091 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SERPINI1Q99574 410 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SH3GL2Q99962 352 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TMEM204Q9BSN7 226 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TTTY12Q9BZ98 90 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 C20orf27Q9GZN8 174 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 DEFB127Q9H1M4 99 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 ZDHHC11Q9H8X9 412 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 VIPAS39Q9H9C1 493 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 TMBIM4Q9HC24 238 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SH2D2AQ9NP31 389 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CHST11Q9NPF2 352 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 FARSBQ9NSD9 589 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 BEX4Q9NWD9 120 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NMRK1Q9NWW6 199 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HPF1Q9NWY4 346 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 AHSPQ9NZD4 102 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SLC17A7Q9P2U7 560 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 VPS29Q9UBQ0 182 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 NDRG3Q9UGV2 375 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 PHF11Q9UIL8 331 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 HAO1Q9UJM8 370 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 CES1P1Q9UKY3 287 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 SNX6Q9UNH7 406 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 STK38LQ9Y2H1 464 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 WBP11Q9Y2W2 641 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 USP9XQ93008 2570 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 MYO7BQ6PIF6 2116 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 LRRK2Q5S007 2527 aa3.17□□□□□ -1.9
UBE2D3-226ENST00000508635 DIDO1Q9BTC0 2240 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 ZNF407Q9C0G0 2248 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 DOPEY2Q9Y3R5 2298 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 CELSR2Q9HCU4 2923 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 TEX13CA0A0J9YWL9 993 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 A0A1B0GVC2 190 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 CBY3A6NI87 242 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 GLOD5A6NK44 160 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 FAM166BA8MTA8 275 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 G3V3Y1 287 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 IFNL4K9M1U5 179 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 EBAG9O00559 213 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 TIMM23O14925 209 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 TFECO14948 347 aaPredicted RBP3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 AZIN1O14977 448 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PGRMC2O15173 223 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 KCNAB3O43448 404 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 CDC40O60508 579 aaKnown RBP eCLIP3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PDE9AO76083 593 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 OR4F21O95013 312 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 CLDN14O95500 239 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 AIFM1O95831 613 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 IGHG3P01860 377 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 KRT6AP02538 564 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 GBAP04062 536 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 KRT6BP04259 564 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 KLK1P06870 262 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 TPOP07202 933 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PRSS2P07478 247 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 SLC35E2P0CK97 266 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 CCL3P10147 92 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 UROSP10746 265 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 COX7A2P14406 83 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 SRD5A1P18405 259 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 POU1F1P28069 291 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 RYKP34925 604 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PTGER4P35408 488 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PIGAP37287 484 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 MAGEA5P43359 124 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 KRT6CP48668 564 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 DNASE1L1P49184 302 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 FOXA1P55317 472 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 UFM1P61960 85 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 TRA2BP62995 288 aaKnown RBP3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 VAMP2P63027 116 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 ERVK-8P63133 956 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PLIN5Q00G26 463 aa3.16□□□□□ -1.9
UBE2D3-226ENST00000508635 PLGLB1Q02325 96 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms