RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ERI3O43414 337 aaKnown RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 SRMP19623 302 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
NUP54-205ENST00000507257 SLC16A1P53985 500 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 OR1Q1Q15612 314 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 TMEM52BQ4KMG9 183 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 SFRP5Q5T4F7 317 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 ARHGAP11AQ6P4F7 1023 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 ADAMTSL4Q6UY14 1074 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 ERN2Q76MJ5 926 aaKnown RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 SYT9Q86SS6 491 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 LRRTM4Q86VH4 590 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 CLRN3Q8NCR9 226 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 OR6K3Q8NGY3 331 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 BPIFA2Q96DR5 249 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 S100A16Q96FQ6 103 aaKnown RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 MRPL48Q96GC5 212 aaKnown RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 TRMT61BQ9BVS5 477 aaKnown RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 SLC25A32Q9H2D1 315 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 CYB5R1Q9UHQ9 305 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 SERTAD3Q9UJW9 196 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 FBXO9Q9UK97 447 aaPredicted RBP16.38■□□□□ 0.21
NUP54-205ENST00000507257 FOXJ3Q9UPW0 622 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 PCDHGA5Q9Y5G8 931 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 ETV7Q9Y603 341 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 CENPFP49454 3210 aa16.38■□□□□ 0.21
NUP54-205ENST00000507257 UBE2QL1A1L167 161 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 LILRB3O75022 631 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 HPP00738 406 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 EGFP01133 1207 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 C8orf89P0DMQ9 161 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 HTR2AP28223 471 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 BCL6P41182 706 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SIM1P81133 766 aaPredicted RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 MAT1AQ00266 395 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 LY6G5CQ5SRR4 150 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 C18orf63Q68DL7 685 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 MTFR2Q6P444 385 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 ALKAL2Q6UX46 152 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SLC36A1Q7Z2H8 476 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 PM20D2Q8IYS1 436 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 STPG2Q8N412 459 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 KCT2Q8NC54 265 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 OR2A1Q8NGT9 310 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 MARC2Q969Z3 335 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 HAVCR1Q96D42 359 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 DERL3Q96Q80 235 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 NRTNQ99748 197 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 MRPL15Q9P015 296 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 SLC23A2Q9UGH3 650 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 PRELID3BQ9Y3B1 194 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 MED31Q9Y3C7 131 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SCN5AQ14524 2016 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 SDC3O75056 442 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 DBIP07108 87 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 HOXB3P14651 431 aaPredicted RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 RPA2P15927 270 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 ANXA7P20073 488 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 P2RX1P51575 399 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SCAND1P57086 179 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 GMFBP60983 142 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 ETFDHQ16134 617 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 AMZ1Q400G9 498 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 TP53I3Q53FA7 332 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SHEQ5VZ18 495 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 NRROSQ86YC3 692 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 ZNF454Q8N9F8 522 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 SLC16A11Q8NCK7 471 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 TMIEQ8NEW7 156 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 OR13C2Q8NGS9 318 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 PAWRQ96IZ0 340 aaKnown RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 OR14A2Q96R54 314 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 GFI1Q99684 422 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 MS4A7Q9GZW8 240 aaPredicted RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 ZNF350Q9GZX5 532 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 RSPH9Q9H1X1 276 aaPredicted RBP16.37■□□□□ 0.21
NUP54-205ENST00000507257 C14orf105Q9NVL8 296 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 KLK11Q9UBX7 282 aa16.37■□□□□ 0.21
NUP54-205ENST00000507257 TRBV2A0A0J9YWF9 115 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 A0A1W2PS29 197 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 DNASE2O00115 360 aaPredicted RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 FUT1P19526 365 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 FAUP35544 74 aaKnown RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 SREBF2Q12772 1141 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 PWWP2BQ6NUJ5 590 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 PMM1Q92871 262 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 CDS1Q92903 461 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 MRPS24Q96EL2 167 aaKnown RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 CNN2Q99439 309 aaKnown RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 SDF2Q99470 211 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 RAB11FIP5Q9BXF6 653 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 ARL6Q9H0F7 186 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 PRSS16Q9NQE7 514 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 EXOSC3Q9NQT5 275 aaKnown RBP16.36■□□□□ 0.21
NUP54-205ENST00000507257 FBXL21Q9UKT6 434 aa16.36■□□□□ 0.21
NUP54-205ENST00000507257 A0A1W2PPK0 400 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 PIN1P1O15428 100 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms