RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PRODH2Q9UF12 536 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MUTYHQ9UIF7 546 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 VANGL2Q9ULK5 521 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PACSIN2Q9UNF0 486 aaPredicted RBP3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 PDE10AQ9Y233 779 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 USP16Q9Y5T5 823 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 TNIKQ9UKE5 1360 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 MYH15Q9Y2K3 1946 aa3.11□□□□□ -1.91
TRAPPC13-208ENST00000505553 TRAV25A0A0B4J276 109 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TCRBV9S1A1TA0A576 114 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ERICH4A6NGS2 130 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 FAM220BPB1ANY3 271 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC17A2O00624 439 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SOCS3O14543 225 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CLOCKO15516 846 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PSTPIP1O43586 416 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CABYRO75952 493 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR2F2O95006 317 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GAS8-AS1O95177 125 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 LYPD3O95274 346 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OTCP00480 354 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 LALBAP00709 142 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GAPDHP04406 335 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 S100A9P06702 114 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TPM1P09493 284 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 EIF2S2P20042 333 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PTBP1P26599 531 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PRDX3P30048 256 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 EPHX2P34913 555 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 LEPP41159 167 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CDKN1BP46527 198 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PRELPP51888 382 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RIPK4P57078 832 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC10A7Q0GE19 358 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 FCHO2Q0JRZ9 810 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SCRN3Q0VDG4 424 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ELAVL2Q12926 359 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 IFT88Q13099 833 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 DNAJC3Q13217 504 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GNMTQ14749 295 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC10A1Q14973 349 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TGFBIQ15582 683 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 DUSP7Q16829 419 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 C2CD6Q53TS8 623 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 METTL11BQ5VVY1 283 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TMEM53Q6P2H8 277 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 HSDL2Q6YN16 418 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 MARCH9Q86YJ5 346 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GABRG1Q8N1C3 465 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SLC22A18ASQ8N1D0 253 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CATSPER1Q8NEC5 780 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OR52H1Q8NGJ2 320 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 UFD1Q92890 307 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PPP1R16AQ96I34 528 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GSDMAQ96QA5 445 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PANX2Q96RD6 677 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 MBOAT4Q96T53 435 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CCDC28BQ9BUN5 200 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ELOVL4Q9GZR5 314 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZBP1Q9H171 429 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 B3GNT2Q9NY97 397 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PDP1Q9P0J1 537 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RIMS3Q9UJD0 308 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ANGPTL2Q9UKU9 493 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PLEKHH1Q9ULM0 1364 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PHLPP2Q6ZVD8 1323 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 LOC100131303A0A0U1RQF7 123 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A1W2PPV9 198 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 EFCAB7A8K855 629 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 KIF2AO00139 706 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 HIP1O00291 1037 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 AKR7A2O43488 359 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 EDIL3O43854 480 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SCRG1O75711 98 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GJB5O95377 273 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OXSR1O95747 527 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ERCC1P07992 297 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CCNB1P14635 433 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 IDSP22304 550 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 HOXD10P28358 340 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CD1BP29016 333 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 HSD17B2P37059 387 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 NAMPTP43490 491 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RFX3P48380 749 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RPL34P49207 117 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CSRP3P50461 194 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ETV1P50549 477 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PLK1P53350 603 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 LIM2P55344 173 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CLDN8P56748 225 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ERVK11-1P61568 191 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 VGLL4Q14135 290 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OXA1LQ15070 435 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PLCXD3Q63HM9 321 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 FBXL22Q6P050 247 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms