RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TAB1Q15750 504 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 ACKR1Q16570 336 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 AGKQ53H12 422 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 DLEU7Q6UYE1 221 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 HDXQ7Z353 690 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 SERPINA11Q86U17 422 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 CMIPQ8IY22 773 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 SMR3AQ99954 134 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 RMND5AQ9H871 391 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 SERINC1Q9NRX5 453 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 INTS9Q9NV88 658 aaKnown RBP11.15□□□□□ -0.62
HSPG2-212ENST00000493940 ZNF446Q9NWS9 450 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 KLHL9Q9P2J3 617 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
HSPG2-212ENST00000493940 ANK3Q12955 4377 aaKnown RBP11.15□□□□□ -0.62
HSPG2-212ENST00000493940 CFAP73A6NFT4 308 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF724A8MTY0 619 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 NR5A2O00482 541 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 FAAHO00519 579 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 FPR1P21462 350 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 ADSLP30566 484 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-212ENST00000493940 POLR2HP52434 150 aaKnown RBP11.14□□□□□ -0.63
HSPG2-212ENST00000493940 TXNL4AP83876 142 aaKnown RBP11.14□□□□□ -0.63
HSPG2-212ENST00000493940 HPCAP84074 193 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 SELPLGQ14242 412 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 ADRM1Q16186 407 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 Q6ZT83 130 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 RETREG3Q86VR2 466 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 PEX5LQ8IYB4 626 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 CIARTQ8N365 385 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-212ENST00000493940 TMEM99Q8N816 258 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 ZIC4Q8N9L1 334 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 SLC25A43Q8WUT9 341 aaPredicted RBP11.14□□□□□ -0.63
HSPG2-212ENST00000493940 MAGEB18Q96M61 343 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 VIPAS39Q9H9C1 493 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 A4GALTQ9NPC4 353 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 NPAP1Q9NZP6 1156 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 TMEM181Q9P2C4 612 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 HDGFL3Q9Y3E1 203 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
HSPG2-212ENST00000493940 UQCRHLA0A096LP55 91 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 A0A0G2JPF8 293 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 DPRXA6NFQ7 191 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 HNRNPCL3B7ZW38 293 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 TPST2O60704 377 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 HNRNPCL1O60812 293 aaKnown RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 EDF1O60869 148 aaKnown RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 PGM3O95394 542 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 HNRNPCL4P0DMR1 293 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 FOSL1P15407 271 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 MAGEA8P43361 318 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 P2RY4P51582 365 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 CRISP3P54108 245 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 CSNK2A1P68400 391 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 EGR4Q05215 589 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 SF3A3Q12874 501 aaKnown RBP eCLIP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 ITGADQ13349 1161 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 CEACAM7Q14002 265 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 RNF220Q5VTB9 566 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF704Q6ZNC4 412 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF433Q8N7K0 673 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 NFKBIDQ8NI38 313 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 PMM1Q92871 262 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 C3orf49Q96BT1 292 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 SPATA9Q9BWV2 254 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 OR10A4Q9H209 315 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 DCTN4Q9UJW0 460 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 TRAPPC4Q9Y296 219 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 NSD1Q96L73 2696 aaPredicted RBP11.13□□□□□ -0.63
HSPG2-212ENST00000493940 RTTNQ86VV8 2226 aa11.13□□□□□ -0.63
HSPG2-212ENST00000493940 FBN3Q75N90 2809 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 A0A1W2PR80 420 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 LIPT2A6NK58 231 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 TMEM229AB2RXF0 380 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF208O43345 1280 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 NPIPB7O75200 414 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 AKR7A3O95154 331 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 THBS1P07996 1170 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ARAFP10398 606 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 PPP3CBP16298 524 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 COX5AP20674 150 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ANXA11P50995 505 aaKnown RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ATP4BP51164 291 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 SLC16A1P53985 500 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 NKX6-1P78426 367 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 LGALS3BPQ08380 585 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 PDK3Q15120 406 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 BEX5Q5H9J7 111 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms