RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
CSNK1E-208ENST00000431611 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 HTR3AP46098 478 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 VSNL1P62760 191 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 H3F3AP84243 136 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 PLAURQ03405 335 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 CASP8Q14790 479 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 B3GLCTQ6Y288 498 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 CNOT9Q92600 299 aaKnown RBP13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC35A5Q9BS91 424 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 INPP5KQ9BT40 448 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 PARPBPQ9NWS1 579 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 RAP2CQ9Y3L5 183 aa13.3□□□□□ -0.28
CSNK1E-208ENST00000431611 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 HMGN4O00479 90 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 AP3D1O14617 1153 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 ZNF208O43345 1280 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 ITGA5P08648 1049 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 S100A3P33764 101 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 RPL14P50914 215 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 POLR2HP52434 150 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 CLNS1AP54105 237 aaKnown RBP13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC35A1P78382 337 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 DPY19L1Q2PZI1 675 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 C6orf52Q5T4I8 152 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 C9orf135Q5VTT2 229 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 CMIPQ8IY22 773 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 WDR31Q8NA23 367 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 HTRA1Q92743 480 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 PMM1Q92871 262 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 TRIM44Q96DX7 344 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 TNFRSF13CQ96RJ3 184 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 NAA11Q9BSU3 229 aaPredicted RBP13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 OSGIN1Q9UJX0 560 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC9A8Q9Y2E8 581 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 TMED7Q9Y3B3 224 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 FLVCR1Q9Y5Y0 555 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 ATP23Q9Y6H3 246 aa13.29□□□□□ -0.28
CSNK1E-208ENST00000431611 A0A096LNT2 108 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ELOA3DA6NLF2 546 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 E9PBE3 544 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 H7C417 338 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 PDLIM1O00151 329 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 BIRC5O15392 142 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SNUPNO95149 360 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 C1QCP02747 245 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 IMPDH2P12268 514 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 BMP4P12644 408 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC25A16P16260 332 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 LBPP18428 481 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 TACR3P29371 465 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 LOXL1Q08397 574 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 GNA13Q14344 377 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SYPL1Q16563 259 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ELOA3BQ3SY89 546 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 FAM174BQ3ZCQ3 159 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 TSPO2Q5TGU0 170 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 RNF130Q86XS8 419 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 C17orf78Q8N4C9 275 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ANKFN1Q8N957 763 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ELOA3Q8NG57 546 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 AENQ8WTP8 325 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 CCDC115Q96NT0 180 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 NUF2Q9BZD4 464 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 AMBRA1Q9C0C7 1298 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 C20orf27Q9GZN8 174 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC38A1Q9H2H9 487 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 FKRPQ9H9S5 495 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC17A5Q9NRA2 495 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SLC7A10Q9NS82 523 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 DCTN4Q9UJW0 460 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 AMDHD2Q9Y303 409 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 ATRQ13535 2644 aa13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 CHD3Q12873 2000 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 SONP18583 2426 aaKnown RBP13.28□□□□□ -0.28
CSNK1E-208ENST00000431611 COL6A5A8TX70 2615 aa13.27□□□□□ -0.28
CSNK1E-208ENST00000431611 CADP27708 2225 aa13.27□□□□□ -0.28
CSNK1E-208ENST00000431611 TMEM72A0PK05 275 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 CCDC154A6NI56 674 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 AGAP5A6NIR3 686 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 UQCRBP14927 111 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 IL7RP16871 459 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 SLC1A3P43003 542 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 SLC1A6P48664 564 aa13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 ANXA11P50995 505 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-208ENST00000431611 MAP2K6P52564 334 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms