RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 GSTM3P21266 225 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 AHCYP23526 432 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 BMP8BP34820 402 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 FAM74A1Q5RGS3 127 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 CLVS2Q5SYC1 327 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 SLC6A19Q695T7 634 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 NIPAL3Q6P499 406 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 MEPCEQ7L2J0 689 aaKnown RBP7.99□□□□□ -1.13
USP40-203ENST00000427112 BMP8AQ7Z5Y6 402 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 LRRC25Q8N386 305 aaPredicted RBP7.99□□□□□ -1.13
USP40-203ENST00000427112 WNT2BQ93097 391 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 SLC25A36Q96CQ1 311 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 HS6ST2Q96MM7 605 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 ZNF285Q96NJ3 590 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 SDF2Q99470 211 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 PINK1Q9BXM7 581 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 ACTRT3Q9BYD9 372 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 DPAGT1Q9H3H5 408 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 CA10Q9NS85 328 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 COPS3Q9UNS2 423 aa7.99□□□□□ -1.13
USP40-203ENST00000427112 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 MTCL1Q9Y4B5 1905 aaKnown RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 A0A0A6YYC8 382 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 TMEM129A0AVI4 362 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 I3L1I5 382 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 SPDEFO95238 335 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 MPC2O95563 127 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TFP02787 698 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 MT-ND5P03915 603 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 DDX6P26196 483 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP40-203ENST00000427112 PPM1AP35813 382 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GDNFP39905 211 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 RPS5P46782 204 aaKnown RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 FZD5Q13467 585 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 ALG10BQ5I7T1 473 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TMEM201Q5SNT2 666 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 DCST2Q5T1A1 773 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 OR10K2Q6IF99 312 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GDPGP1Q6ZNW5 385 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 C17orf107Q6ZR85 190 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TMPRSS9Q7Z410 1059 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 VN1R4Q7Z5H5 301 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 ARIH2OSQ8N7S6 290 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 OR4K14Q8NGD5 310 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CYYR1Q96J86 154 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TTYH1Q9H313 450 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 RETREG1Q9H6L5 497 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 PHPT1Q9NRX4 125 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 NPAP1Q9NZP6 1156 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 SVILO95425 2214 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TMEM72A0PK05 275 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 C1QBP02746 253 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CXCL10P02778 98 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 RPN2P04844 631 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 FOSL1P15407 271 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 BNC1Q01954 994 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 SCRN3Q0VDG4 424 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 SIGIRRQ6IA17 410 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CFAP77Q6ZQR2 320 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 ANKRD33Q7Z3H0 272 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TMPRSS12Q86WS5 348 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CMTM4Q8IZR5 234 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 MEIOBQ8N635 442 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 THEM6Q8WUY1 208 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GLTPQ9NZD2 209 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 KLHL21Q9UJP4 597 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 FKBP7Q9Y680 259 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GVINP1Q7Z2Y8 2422 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 EFEMP2O95967 443 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CA3P07451 260 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 HTR1FP30939 366 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GJA4P35212 333 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 BTG2P78543 158 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TDGQ13569 410 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GRK1Q15835 563 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 MRM1Q6IN84 353 aaKnown RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 OR52R1Q8NGF1 315 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 OR56A1Q8NGH5 318 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 OR51A4Q8NGJ6 313 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 SPPL3Q8TCT6 385 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 THAP3Q8WTV1 239 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 DNAJA4Q8WW22 397 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 OR1E3Q8WZA6 343 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 CXorf58Q96LI9 332 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 Q96M85 177 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GAL3ST4Q96RP7 486 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 GAS2L1Q99501 681 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 LRIT1Q9P2V4 623 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 ADAM30Q9UKF2 790 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 ELF5Q9UKW6 265 aaPredicted RBP7.98□□□□□ -1.13
USP40-203ENST00000427112 MED31Q9Y3C7 131 aa7.98□□□□□ -1.13
USP40-203ENST00000427112 TRIOBPQ9H2D6 2365 aa7.97□□□□□ -1.13
USP40-203ENST00000427112 NCOR1O75376 2440 aa7.97□□□□□ -1.13
USP40-203ENST00000427112 A0A1B0GWA3 101 aa7.97□□□□□ -1.13
USP40-203ENST00000427112 TRABD2BA6NFA1 517 aa7.97□□□□□ -1.13
USP40-203ENST00000427112 C2orf74A8MZ97 194 aa7.97□□□□□ -1.13
USP40-203ENST00000427112 ZNF593O00488 134 aaPredicted RBP7.97□□□□□ -1.13
USP40-203ENST00000427112 CEACAM5P06731 702 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms