RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 WDR77Q9BQA1 342 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CCDC28BQ9BUN5 200 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 POLDIP3Q9BY77 421 aaKnown RBP4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 SCAND2PQ9GZW5 306 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 THSD1Q9NS62 852 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 USE1Q9NZ43 259 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CD274Q9NZQ7 290 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 RAB23Q9ULC3 237 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 FAF1Q9UNN5 650 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 PRG3Q9Y2Y8 225 aaPredicted RBP4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 PAM16Q9Y3D7 125 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 HYOU1Q9Y4L1 999 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 CDH10Q9Y6N8 788 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 R4GN57 208 aa4.84□□□□□ -1.63
PTP4A1P1-201ENST00000420539 A0A087X1B8 175 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TRBV5-5A0A0J9YX44 114 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 GOLGA6L10A6NI86 522 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SMIM23A6NLE4 172 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 H0YJX3 145 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 GOLGA6L19H0YKK7 550 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 BLOC1S5-TXNDC5H3BN57 136 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 EPHB6O15197 1021 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ANXA9O76027 345 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DEXIO95424 95 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NADKO95544 446 aaPredicted RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FGGP02679 453 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ATP1A1P05023 1023 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CHRNB1P11230 501 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 IDSP22304 550 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 GDF5P43026 501 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 QARSP47897 775 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CSNK1A1P48729 337 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PGFP49763 221 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RARRES1P49788 294 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPL14P50914 215 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 B3GALT5-AS1P59052 145 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 UBE2KP61086 200 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPS15AP62244 130 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPS18P62269 152 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPS6P62753 249 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PAX2Q02962 417 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CAPRIN1Q14444 709 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RBM39Q14498 530 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ALX1Q15699 326 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C3AR1Q16581 482 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ISXQ2M1V0 245 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C2CD6Q53TS8 623 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C1orf220Q5T0J3 134 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MARCH8Q5T0T0 291 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 BSPRYQ5W0U4 402 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 OR5M10Q6IEU7 315 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 APOBEC3HQ6NTF7 200 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SHC4Q6S5L8 630 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RTL4Q6ZR62 310 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MRGPRGQ86SM5 289 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DHRSXQ8N5I4 330 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CCNYL1Q8N7R7 359 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CCDC112Q8NEF3 446 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MRPL24Q96A35 216 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ZFP3Q96NJ6 502 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NEDD4LQ96PU5 975 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TAAR1Q96RJ0 339 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ATP5SQ99766 215 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TMEM121Q9BTD3 319 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DCUN1D5Q9BTE7 237 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 APOOQ9BUR5 198 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DUSP26Q9BV47 211 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SYT4Q9H2B2 425 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 VCX3AQ9NNX9 186 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ABCB10Q9NRK6 738 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DUS2Q9NX74 493 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FBXL4Q9UKA2 621 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 EIF3LQ9Y262 564 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 AK6Q9Y3D8 172 aaKnown RBP4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 V9GYY9 64 aa4.83□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ADGRA3Q8IWK6 1321 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NSG1A0A0A6YYJ2 146 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SMIM22K7EJ46 135 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RGS16O15492 202 aaPredicted RBP4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CYTH3O43739 400 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 KIAA0513O60268 411 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 KHDRBS3O75525 346 aaKnown RBP4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CRYABP02511 175 aaKnown RBP4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ATP1B1P05026 303 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 KLK1P06870 262 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FABP1P07148 127 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 HOXC6P09630 235 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PET100P0DJ07 73 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DPEP1P16444 411 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PSMC3P17980 439 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PRPS1L1P21108 318 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 IVDP26440 423 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 G0S2P27469 103 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 IFNA8P32881 189 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MAS1LP35410 378 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NBL1P41271 181 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NSG1P42857 185 aa4.82□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PTH2RP49190 550 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms