RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 B2RBV5 119 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 EEF1E1-BLOC1S5C9J1V9 151 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SYT5O00445 386 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CXCR6O00574 342 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SMAD9O15198 467 aaKnown RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 EEF1E1O43324 174 aaKnown RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SYNGR4O95473 234 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 THY1P04216 161 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 T-ENOLP0DO92 83 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 UQCRBP14927 111 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 FUT4P22083 530 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CPOXP36551 454 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 KIR2DL2P43627 348 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 OR1E2P47887 323 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 OR2B6P58173 313 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 NCALDP61601 193 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 COPZ1P61923 177 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 MXRA7P84157 204 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 EGR4Q05215 589 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 FOXD4Q12950 439 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 GUSBP1Q15486 140 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 OR1Q1Q15612 314 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ZSWIM7Q19AV6 140 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CYBRD1Q53TN4 286 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ALG10BQ5I7T1 473 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 WDR88Q6ZMY6 472 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 TMPPEQ6ZT21 453 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 BTLAQ7Z6A9 289 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 VTCN1Q7Z7D3 282 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 LUZP2Q86TE4 346 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CARM1Q86X55 608 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 DEFB107AQ8IZN7 70 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 RNF128Q8TEB7 428 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SLC25A43Q8WUT9 341 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CPNE4Q96A23 557 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 STARD4Q96DR4 205 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 NSL1Q96IY1 281 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 TPD52L3Q96J77 140 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ZNF300Q96RE9 604 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 KCTD14Q9BQ13 255 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SPAG4Q9NPE6 437 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 KLHL28Q9NXS3 571 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 TESQ9UGI8 421 aaKnown RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ING1Q9UK53 422 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 MCTS1Q9ULC4 181 aaKnown RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 SH3GLB1Q9Y371 365 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ZNF175Q9Y473 711 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 CACNA1CQ13936 2221 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 ICE1Q9Y2F5 2266 aa6.89□□□□□ -1.31
CPSF4-202ENST00000412686 RP1L1Q8IWN7 2480 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-202ENST00000412686 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 INTS1Q8N201 2190 aaKnown RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 A0A0B4J2E0 115 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 A0A1B0GX12 115 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 LRRN3E7EW58 273 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 SULT2B1O00204 365 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 DVL2O14641 736 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 GSTA4O15217 222 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ZNF208O43345 1280 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.311e-8■■■■■ 30.2
CPSF4-202ENST00000412686 UBOX5O94941 541 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 LYPD3O95274 346 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ZNF682O95780 498 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 SERPINA1P01009 418 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 GGT1P19440 569 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 FPR1P21462 350 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 CBLP22681 906 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 CXCR1P25024 350 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 EDNRAP25101 427 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 AGTR1P30556 359 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 OPRM1P35372 400 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 HTR3AP46098 478 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 CDH12P55289 794 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 RAC3P60763 192 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 CEACAM7Q14002 265 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 OR7A5Q15622 319 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ENTPD8Q5MY95 495 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 PDSS1Q5T2R2 415 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 C6orf89Q6UWU4 347 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 DEF8Q6ZN54 512 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 FCRLAQ7L513 359 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 NUFIP2Q7Z417 695 aaKnown RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 RANBP3LQ86VV4 465 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 CCDC103Q8IW40 242 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 TUSC5Q8IXB3 177 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 FAM86B1Q8N7N1 296 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 LSMEM1Q8N8F7 131 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 BHLHE22Q8NFJ8 381 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 ADAMTS16Q8TE57 1224 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 SLC35B4Q969S0 331 aa6.88□□□□□ -1.31
CPSF4-202ENST00000412686 FAM162AQ96A26 154 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms