RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TNFRSF13CQ96RJ3 184 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 MCCC2Q9HCC0 563 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 NRIP3Q9NQ35 241 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 SCP2D1Q9UJQ7 156 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 ICAM5Q9UMF0 924 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 A0A1B0GWA3 101 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 A0A1W2PRG6 482 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 NARSO43776 548 aaKnown RBP16.53■□□□□ 0.24
PHF1-201ENST00000374512 PRAF2O60831 178 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 CTSVO60911 334 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 NKX2-2O95096 273 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 GABRA3P34903 492 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 HYAL1Q12794 435 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 NFATC4Q14934 902 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 FIGLAQ6QHK4 219 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 UNQ9370/PRO34162Q6UXP9 181 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 RD3Q7Z3Z2 195 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 MRPL38Q96DV4 380 aaKnown RBP16.53■□□□□ 0.24
PHF1-201ENST00000374512 PELI1Q96FA3 418 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 PEX11GQ96HA9 241 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 PLEKHA1Q9HB21 404 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 MAT2BQ9NZL9 334 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 CHRNA9Q9UGM1 479 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 NPTNQ9Y639 398 aa16.53■□□□□ 0.24
PHF1-201ENST00000374512 GXYLT2A0PJZ3 443 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 NAP1L6A6NFF2 107 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 GPR171O14626 319 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 TSC22D2O75157 780 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 SNAPC5O75971 98 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 ECDO95905 644 aaPredicted RBP16.52■□□□□ 0.24
PHF1-201ENST00000374512 SNRPBP14678 240 aaKnown RBP16.52■□□□□ 0.24
PHF1-201ENST00000374512 UQCRC1P31930 480 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 MGAT2Q10469 447 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 ILF3Q12906 894 aaKnown RBP eCLIP16.52■□□□□ 0.24
PHF1-201ENST00000374512 FHL1Q13642 323 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 FCRLBQ6BAA4 426 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 FIGNL1Q6PIW4 674 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 SSX6Q7RTT6 188 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 CTHRC1Q96CG8 243 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 MRI1Q9BV20 369 aa16.52■□□□□ 0.24
PHF1-201ENST00000374512 PDCD5O14737 125 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 FGF17O60258 216 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 NDUFB2O95178 105 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 HOXB2P14652 356 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ACTR1BP42025 376 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 EPHA4P54764 986 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ACTR1AP61163 376 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 SNRPNP63162 240 aaKnown RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 CAMK2DQ13557 499 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 COL9A2Q14055 689 aaPredicted RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 FCRL6Q6DN72 434 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 LINC00114Q6XXX2 140 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 TIGD4Q8IY51 512 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 OR14A16Q8NHC5 309 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 GRHL3Q8TE85 626 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 RERGQ96A58 199 aaPredicted RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ERMAPQ96PL5 475 aaPredicted RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 ZFYVE21Q9BQ24 234 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 GSDMCQ9BYG8 508 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 FLRT3Q9NZU0 649 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 FBXL4Q9UKA2 621 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 PCDHGA9Q9Y5G4 932 aaKnown RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 NPIPA5A0A0B4J1W7 369 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 TEX51A0A1B0GUA7 166 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 NPIPA7E9PJI5 369 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 CYR61O00622 381 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ICMTO60725 284 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 IFNA7P01567 189 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 NPIPA8P0DM63 369 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 CXCL3P19876 107 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 AP3S2P59780 193 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 RPS11P62280 158 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHF1-201ENST00000374512 PLAURQ03405 335 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 TP53I3Q53FA7 332 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 SLC35D3Q5M8T2 416 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 RFPL4BQ6ZWI9 263 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ZNF527Q8NB42 609 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 CCL4L1Q8NHW4 92 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 ZNF671Q8TAW3 534 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 SNX33Q8WV41 574 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 GIMAP1Q8WWP7 306 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 CNOT9Q92600 299 aaKnown RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 CLEC4MQ9H2X3 399 aaPredicted RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 HEXA-AS1Q9H8Q6 139 aa16.51■□□□□ 0.23
PHF1-201ENST00000374512 USP36Q9P275 1121 aaKnown RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 MRPS7Q9Y2R9 242 aaKnown RBP16.51■□□□□ 0.23
PHF1-201ENST00000374512 TRBV23OR9-2A0A075B6M9 112 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 LOC105369274A0A096LPK9 316 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 TRBV2A0A0J9YWF9 115 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 A0A1W2PQF6 199 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 LDB3O75112 727 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 DNAJB6O75190 326 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 PEX14O75381 377 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 TGM6O95932 706 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 TFP02787 698 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 COL9A1P20849 921 aa16.5■□□□□ 0.23
PHF1-201ENST00000374512 ID2Q02363 134 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms