RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 MASP1P48740 699 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 CDK5R2Q13319 367 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 BROXQ5VW32 411 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 TIGD3Q6B0B8 471 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 ACSM5Q6NUN0 579 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 ZNF248Q8NDW4 579 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 POC1BQ8TC44 478 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 APH1BQ8WW43 257 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 ENKD1Q9H0I2 346 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 PTGES2Q9H7Z7 377 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 SLC25A19Q9HC21 320 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 TBC1D23Q9NUY8 699 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 ZNF226Q9NYT6 803 aa16.86■□□□□ 0.29
CLN3-206ENST00000360019 NPIPB7O75200 414 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 PTP4A3O75365 173 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 OR7A10O76100 309 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 CASRP41180 1078 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 CDC42P60953 191 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 ZNF74Q16587 644 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 AGAP7PQ5VUJ5 663 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 C1QL3Q5VWW1 255 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 OAFQ86UD1 273 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 OR1J4Q8NGS1 313 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 OR51A7Q8NH64 312 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 OSTF1Q92882 214 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 TAAR8Q969N4 342 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 MRGPRX4Q96LA9 322 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 SAMD8Q96LT4 415 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 JSRP1Q96MG2 331 aaPredicted RBP16.85■□□□□ 0.29
CLN3-206ENST00000360019 AGAP4Q96P64 663 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 TSSK6Q9BXA6 273 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 ZNF552Q9H707 407 aaPredicted RBP16.85■□□□□ 0.29
CLN3-206ENST00000360019 ZNF696Q9H7X3 374 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 MYRFQ9Y2G1 1151 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 PCDHGB6Q9Y5F9 930 aa16.85■□□□□ 0.29
CLN3-206ENST00000360019 WBP4O75554 376 aaKnown RBP16.84■□□□□ 0.29
CLN3-206ENST00000360019 GABRB1P18505 474 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 TCEA1P23193 301 aaKnown RBP16.84■□□□□ 0.29
CLN3-206ENST00000360019 APOBEC1P41238 236 aaKnown RBP16.84■□□□□ 0.29
CLN3-206ENST00000360019 GPR85P60893 370 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 FOXK1P85037 733 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 LTBQ06643 244 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 OR1C1Q15619 314 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 C6orf141Q5SZD1 244 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 SLC27A4Q6P1M0 643 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 THSD4Q6ZMP0 1018 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 CCDC103Q8IW40 242 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 DEPDC4Q8N2C3 294 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 OR4Q3Q8NH05 313 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 RHOXF1Q8NHV9 184 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 MOGAT1Q96PD6 335 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 TNFRSF13CQ96RJ3 184 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 PTDSS2Q9BVG9 487 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 TIMMDC1Q9NPL8 285 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 IMPAD1Q9NX62 359 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 HTR3EA5X5Y0 456 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 SLC25A12O75746 678 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 SMNDC1O75940 238 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN3-206ENST00000360019 IL11P20809 199 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 RPS5P46782 204 aaKnown RBP16.84■□□□□ 0.29
CLN3-206ENST00000360019 SMSP52788 366 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 DEFB109BQ30KR1 87 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 SMARCD3Q6STE5 483 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 LIPHQ8WWY8 451 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 DNAJA3Q96EY1 480 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 HES7Q9BYE0 225 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 OR11A1Q9GZK7 315 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 MCCC2Q9HCC0 563 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 CHRNA9Q9UGM1 479 aa16.84■□□□□ 0.29
CLN3-206ENST00000360019 MGAQ8IWI9 3026 aa16.83■□□□□ 0.29
CLN3-206ENST00000360019 SPENQ96T58 3664 aaKnown RBP16.83■□□□□ 0.28
CLN3-206ENST00000360019 ACACAQ13085 2346 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 PINLYPA6NC86 204 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 LRRC3CA6NJW4 275 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 A8MVM7 634 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 EFNA2O43921 213 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 HCN1O60741 890 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 RCBTB2O95199 551 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 CCL11P51671 97 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 SMN1Q16637 294 aaKnown RBP16.83■□□□□ 0.28
CLN3-206ENST00000360019 ZBED5Q49AG3 693 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 OR5M1Q8NGP8 315 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 SNIP1Q8TAD8 396 aaKnown RBP16.83■□□□□ 0.28
CLN3-206ENST00000360019 HDAC2Q92769 488 aaKnown RBP16.83■□□□□ 0.28
CLN3-206ENST00000360019 TVP23BQ9NYZ1 205 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 ZNF337Q9Y3M9 751 aa16.83■□□□□ 0.28
CLN3-206ENST00000360019 TRAV36DV7A0A075B6V5 113 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 OR5H15A6NDH6 313 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 CNR1P21554 472 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 DPP4P27487 766 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 FMO3P31513 532 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 SLC9A3P48764 834 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 DSCR4P56555 118 aaPredicted RBP16.82■□□□□ 0.28
CLN3-206ENST00000360019 RPS4XP62701 263 aaKnown RBP16.82■□□□□ 0.28
CLN3-206ENST00000360019 MFAP5Q13361 173 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 GXYLT1Q4G148 440 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 RPL13AP3Q6NVV1 102 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 CASP12Q6UXS9 341 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 C10orf53Q8N6V4 93 aa16.82■□□□□ 0.28
CLN3-206ENST00000360019 FDCSPQ8NFU4 85 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms