RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TMEM156Q8N614 296 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 OR8J1Q8NGP2 316 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 TMEM234Q8WY98 164 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 KIAA1143Q96AT1 154 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 POLDIP3Q9BY77 421 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 CPNE5Q9HCH3 593 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 ASCL3Q9NQ33 180 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 TVP23BQ9NYZ1 205 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 IL17BQ9UHF5 180 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 CHCHD2Q9Y6H1 151 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 IGKV1D-42A0A075B6H8 117 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 SH3D21A4FU49 640 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 PTGES3LE9PB15 166 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 XPNPEP2O43895 674 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 HCN1O60741 890 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 FAM20BO75063 409 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 PTP4A3O75365 173 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 ATP1A4Q13733 1029 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 SMN1Q16637 294 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 JMJD6Q6NYC1 403 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 SAMD8Q96LT4 415 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 Q96MT0 163 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 OR52D1Q9H346 318 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 DUSP21Q9H596 190 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 GPN2Q9H9Y4 310 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 DLL3Q9NYJ7 618 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 PPP4R1LQ9P1A2 415 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 OSGIN1Q9UJX0 560 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 SIGLEC7Q9Y286 467 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 WIF1Q9Y5W5 379 aa16.07■□□□□ 0.16
SHKBP1-224ENST00000600718 CCDC160A6NGH7 325 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 BMP7P18075 431 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 CXCR1P25024 350 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 HTR3AP46098 478 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 PCYT1AP49585 367 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 POLR2HP52434 150 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 BICRALQ6AI39 1079 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC30A6Q6NXT4 461 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SMARCD3Q6STE5 483 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 GRINAQ7Z429 371 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 OAFQ86UD1 273 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC43A2Q8N370 569 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 OR52L1Q8NGH7 329 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 OR13C2Q8NGS9 318 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 FANK1Q8TC84 345 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 IPCEF1Q8WWN9 437 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 ST8SIA1Q92185 356 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC38A2Q96QD8 506 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 M0R129 80 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 DXOO77932 396 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 HMGN1P05114 100 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 FUT1P19526 365 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC9A3P48764 834 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 EFNB1P98172 346 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 NHLH1Q02575 133 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 DCTN2Q13561 401 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SNAPC1Q16533 368 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 ZBED5Q49AG3 693 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 CLEC12AQ5QGZ9 265 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 TMEM201Q5SNT2 666 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC25A30Q5SVS4 291 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 OR5M10Q6IEU7 315 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 FAM26EQ8N5C1 309 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 TCEANCQ8N8B7 351 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 ZNF540Q8NDQ6 660 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 OR2T33Q8NG76 320 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 IL4I1Q96RQ9 567 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 HPF1Q9NWY4 346 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 MED11Q9P086 117 aa16.06■□□□□ 0.16
SHKBP1-224ENST00000600718 EXPH5Q8NEV8 1989 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 MRPS14O60783 128 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 OR7A10O76100 309 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 DLX5P56178 289 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC35A2P78381 396 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 OCLNQ16625 522 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 PGGHGQ32M88 737 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 OR4Q3Q8NH05 313 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 PAQR8Q8TEZ7 354 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 SGCZQ96LD1 299 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 FRMD6Q96NE9 622 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 UBQLN3Q9H347 655 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 ZNF337Q9Y3M9 751 aa16.05■□□□□ 0.16
SHKBP1-224ENST00000600718 EP300Q09472 2414 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 CH25HO95992 272 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 FXYD6P3P58550 94 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 ACER2Q5QJU3 275 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 MEDAGQ5VYS4 303 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 SLC22A10Q63ZE4 541 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 RTL4Q6ZR62 310 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 OR51A7Q8NH64 312 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 THOC3Q96J01 351 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 TNFRSF13CQ96RJ3 184 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 ANGPTL4Q9BY76 406 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 SH2D2AQ9NP31 389 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 MED17Q9NVC6 651 aa16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 PAK1IP1Q9NWT1 392 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-224ENST00000600718 PSORS1C1Q9UIG5 152 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms