RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 OR2B6P58173 313 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 DSTNP60981 165 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 NKX6-1P78426 367 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 SF3A3Q12874 501 aaKnown RBP eCLIP11.28□□□□□ -0.62e-8■■■■□ 20.1
NPLOC4-213ENST00000573519 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 AGKQ53H12 422 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 SFRP5Q5T4F7 317 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 MRPL2Q5T653 305 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 MSANTD1Q6ZTZ1 278 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 LSRQ86X29 649 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 P3H2Q8IVL5 708 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 GABRG1Q8N1C3 465 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 KISS1RQ969F8 398 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 PIGTQ969N2 578 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 HDHD5Q9BXW7 423 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 PAIP1Q9H074 479 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 OR10A4Q9H209 315 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CALML5Q9NZT1 146 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CCDC167Q9P0B6 97 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 PRSS50Q9UI38 385 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 PCDHB14Q9Y5E9 798 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 ZNF814B7Z6K7 855 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 GKN3PP0CG01 181 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 RPS4Y1P22090 263 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 TACR3P29371 465 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 OR3A2P47893 321 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 MRPL19P49406 292 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 MVDP53602 400 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 NR1H2P55055 460 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 MAPK11Q15759 364 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 STK11Q15831 433 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 LIN52Q52LA3 116 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 RPS26P11Q5JNZ5 115 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 AP1ARQ63HQ0 302 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF836Q6ZNA1 936 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF704Q6ZNC4 412 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 VRK2Q86Y07 508 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 ADGRG3Q86Y34 549 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 UBE2J2Q8N2K1 259 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 DDIT4LQ96D03 193 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 SPDL1Q96EA4 605 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 EMC3Q9P0I2 261 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 SLAMF8Q9P0V8 285 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 ING1Q9UK53 422 aaPredicted RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 HDGFL3Q9Y3E1 203 aa11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
NPLOC4-213ENST00000573519 A0A0G2JND7 137 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 LYZL6O75951 148 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PMS2P2O95744 297 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PLAUP00749 431 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 NUDT7P0C024 238 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 TFPTP0C1Z6 253 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 FKBP2P26885 142 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 SLC1A3P43003 542 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 MAGEA8P43361 318 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 EPS8Q12929 822 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 ITGADQ13349 1161 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 SQLEQ14534 574 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 P2RY6Q15077 328 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PAGE3Q5JUK9 113 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 ABLIM2Q6H8Q1 611 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 C20orf204Q6ZNR8 217 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 Q6ZT83 130 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 BHLHA15Q7RTS1 189 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 MSRB3Q8IXL7 192 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 CADM2Q8N3J6 435 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 SLC38A5Q8WUX1 472 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PMM1Q92871 262 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 PERPQ96FX8 193 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM19Q96HH6 336 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 SLC52A3Q9NQ40 469 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 THUMPD1Q9NXG2 353 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM181Q9P2C4 612 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 OSGIN1Q9UJX0 560 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF443Q9Y2A4 671 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 NOSIPQ9Y314 301 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 F8P00451 2351 aa11.26□□□□□ -0.61
NPLOC4-213ENST00000573519 MPDZO75970 2070 aa11.25□□□□□ -0.61
NPLOC4-213ENST00000573519 A0A096LPI6 279 aa11.25□□□□□ -0.61
NPLOC4-213ENST00000573519 CDHR4A6H8M9 788 aa11.25□□□□□ -0.61
NPLOC4-213ENST00000573519 CLIC1O00299 241 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms