RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 EMP2P54851 167 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 RNF4P78317 190 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 CAMK2BQ13554 666 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 IL11RAQ14626 422 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 CLPPQ16740 277 aaPredicted RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SHFQ7M4L6 423 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MARCH3Q86UD3 253 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SLC22A16Q86VW1 577 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 LRRC17Q8N6Y2 441 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 DNAJA4Q8WW22 397 aaPredicted RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 OIT3Q8WWZ8 545 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SH3YL1Q96HL8 342 aaPredicted RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SPSB2Q99619 263 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MGLLQ99685 303 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 BCL7BQ9BQE9 202 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 IFT27Q9BW83 186 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MCCC2Q9HCC0 563 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 HINT3Q9NQE9 182 aaKnown RBP8.61□□□□□ -1.03
LINC00838-201ENST00000562956 MED17Q9NVC6 651 aa8.61□□□□□ -1.03
LINC00838-201ENST00000562956 SAGE2PA6NJ88 616 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 NOTOA8MTQ0 251 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CLDN25C9JDP6 229 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SLC22A1O15245 554 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CSO75390 466 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RAB36O95755 333 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 HMGN1P05114 100 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 GRK6P43250 576 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CDH11P55287 796 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RAB15P59190 212 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ARPC4P59998 168 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF117Q03924 483 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 FCRLBQ6BAA4 426 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 FAM199XQ6PEV8 388 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CPOQ8IVL8 374 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 LNX2Q8N448 690 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 NANOGP1Q8N7R0 232 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 THAP3Q8WTV1 239 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 METTL21AQ8WXB1 218 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 OTULINQ96BN8 352 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 C8orf44Q96CB5 159 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SEMA4CQ9C0C4 833 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 TP63Q9H3D4 680 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 EXOSC3Q9NQT5 275 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 MRPS18AQ9NVS2 196 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 IGKV1D-42A0A075B6H8 117 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SOCS6O14544 535 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 AIREO43918 545 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 HCN1O60741 890 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 LDOC1O95751 146 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 AVPR2P30518 371 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 FOXK2Q01167 660 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RAB40BQ12829 278 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 TSTQ16762 297 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 KLHL22Q53GT1 634 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SOWAHCQ53LP3 525 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RNLSQ5VYX0 342 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 WBP2NLQ6ICG8 309 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RPL13AP3Q6NVV1 102 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 PLBD1Q6P4A8 553 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 USP43Q70EL4 1123 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 C17orf47Q8NEP4 570 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 OPALINQ96PE5 141 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 WDR77Q9BQA1 342 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 TAPBPLQ9BX59 468 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 OR51E2Q9H255 320 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 MED20Q9H944 212 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ZBTB20Q9HC78 741 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RXFP3Q9NSD7 469 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 LNP1A1A4G5 178 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 KHNYNO15037 678 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF354AO60765 605 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 LCN1P31025 176 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SOX3P41225 446 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 PNLIPRP2P54317 469 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SPHARQ15513 63 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SSX1Q16384 188 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 NXNL2Q5VZ03 156 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 PAPD4Q6PIY7 484 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 B3GLCTQ6Y288 498 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 DBX2Q6ZNG2 339 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CXXC5Q7LFL8 322 aaKnown RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ATG4DQ86TL0 474 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
LINC00838-201ENST00000562956 RFKQ969G6 155 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CENPOQ9BU64 300 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 CRB3Q9BUF7 120 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 HCAR1Q9BXC0 346 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 MROQ9BYG7 248 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 SLC26A1Q9H2B4 701 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ICAM5Q9UMF0 924 aa8.6□□□□□ -1.03
LINC00838-201ENST00000562956 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ALG1L2C9J202 215 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 HCRTR2O43614 444 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms