RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 IRAK3Q9Y616 596 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 AQP8O94778 261 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 NDUFB6O95139 128 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 LDOC1O95751 146 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-205ENST00000539661 F3P13726 295 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 HIST1H1TP22492 207 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-205ENST00000539661 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF136P52737 540 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 GAS6Q14393 721 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 ZIC1Q15915 447 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 SFRP5Q5T4F7 317 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 LRFN4Q6PJG9 635 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 UNQ9370/PRO34162Q6UXP9 181 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 TMPRSS11FQ6ZWK6 438 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 TMEM239Q8WW34 195 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 PIGKQ92643 395 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 MARC2Q969Z3 335 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 GIMAP5Q96F15 307 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 ATG4BQ9Y4P1 393 aa16.27■□□□□ 0.2
RAB40C-205ENST00000539661 A0A1B0GW55 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 A0A1W2PRU2 124 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 D6RAR5 112 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 AIFM1O95831 613 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L2P0CJ85 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L3P0CJ86 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L4P0CJ87 422 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L5P0CJ88 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L6P0CJ89 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4L7P0CJ90 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF3P17036 446 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ERVK-21P61565 698 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ILF3Q12906 894 aaKnown RBP eCLIP16.27■□□□□ 0.19
RAB40C-205ENST00000539661 IL10RAQ13651 578 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF169Q14929 603 aaPredicted RBP16.27■□□□□ 0.19
RAB40C-205ENST00000539661 AGERQ15109 404 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF836Q6ZNA1 936 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 SYT9Q86SS6 491 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 AMZ2Q86W34 360 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 CDK20Q8IZL9 346 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 OR5T2Q8NGG2 359 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 SLC35A4Q96G79 324 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 DUX4Q9UBX2 424 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF175Q9Y473 711 aa16.27■□□□□ 0.19
RAB40C-205ENST00000539661 ANXA2P2A6NMY6 339 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 NRG2O14511 850 aaPredicted RBP16.26■□□□□ 0.19
RAB40C-205ENST00000539661 SPINT1O43278 529 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 THBS1P07996 1170 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 MNDAP41218 407 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 RPS11P62280 158 aaKnown RBP eCLIP16.26■□□□□ 0.19
RAB40C-205ENST00000539661 UBXN2BQ14CS0 331 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 RPL22L1Q6P5R6 122 aaKnown RBP16.26■□□□□ 0.19
RAB40C-205ENST00000539661 GSG1LQ6UXU4 331 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 OR5M9Q8NGP3 310 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 OR1S1Q8NH92 325 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
RAB40C-205ENST00000539661 CLDND1Q9NY35 253 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 LRRK1Q38SD2 2015 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 A0A1W2PPK0 400 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 LGALS8O00214 317 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 ABCD4O14678 606 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 PROS1P07225 676 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 ADRB1P08588 477 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 C8orf89P0DMQ9 161 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 VEGFBP49765 207 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 LINC00303Q3SY05 128 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 CDH26Q8IXH8 852 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 STPG2Q8N412 459 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 ACOT4Q8N9L9 421 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 OR4C6Q8NH72 309 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 KLHL31Q9H511 634 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 PRDM7Q9NQW5 492 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 SPHK2Q9NRA0 654 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 SIGLEC7Q9Y286 467 aa16.26■□□□□ 0.19
RAB40C-205ENST00000539661 TRIOO75962 3097 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TBC1D3EA0A087X179 549 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 RAB40ALP0C0E4 278 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 NOS3P29474 1203 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 MAZP56270 477 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 EEF1A1P68104 462 aaKnown RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SIRPAP78324 504 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SIM1P81133 766 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 FLI1Q01543 452 aaPredicted RBP16.25■□□□□ 0.19
RAB40C-205ENST00000539661 DUSP8Q13202 625 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 ETFDHQ16134 617 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SHEQ5VZ18 495 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 ABHD17CQ6PCB6 329 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SSX6Q7RTT6 188 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 RAB42Q8N4Z0 105 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 CLRN3Q8NCR9 226 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 OR9A2Q8NGT5 310 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 RAB40AQ8WXH6 277 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 MS4A6EQ96DS6 147 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 SLC25A38Q96DW6 304 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 PELI1Q96FA3 418 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 NRTNQ99748 197 aa16.25■□□□□ 0.19
RAB40C-205ENST00000539661 TAS2R10Q9NYW0 307 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms