RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GPD1LQ8N335 351 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ARL6IP6Q8N6S5 226 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CCNYL1Q8N7R7 359 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GDPD1Q8N9F7 314 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF383Q8NA42 475 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CHDHQ8NE62 594 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR8K3Q8NH51 312 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 WDR36Q8NI36 951 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ITFG1Q8TB96 612 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TEX47Q8TBZ9 253 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 AGR3Q8TD06 166 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 FCAMRQ8WWV6 532 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 DEDD2Q8WXF8 326 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 AP3S1Q92572 193 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 DNASE1L2Q92874 299 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PTP4A1Q93096 173 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TCEAL3Q969E4 200 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC38A4Q969I6 547 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ST6GALNAC6Q969X2 333 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLCO4A1Q96BD0 722 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SGK3Q96BR1 496 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 LGALS12Q96DT0 336 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CERS2Q96G23 380 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HSFY1Q96LI6 401 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PPP1R2P1Q96PQ5 205 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 UHRF2Q96PU4 802 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 PELOQ9BRX2 385 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF670Q9BS34 389 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 C20orf27Q9GZN8 174 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 NXF2Q9GZY0 626 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 C2orf40Q9H1Z8 148 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPNS1Q9H2V7 528 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 RANBP3Q9H6Z4 567 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 MEAF6Q9HAF1 191 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 C3orf14Q9HBI5 128 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 VAT1LQ9HCJ6 419 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 POLE3Q9NRF9 147 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 LYARQ9NX58 379 aaKnown RBP3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMOD3Q9NYL9 352 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 CD300AQ9UGN4 299 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ENOPH1Q9UHY7 261 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF6Q9Y252 685 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 KCNK7Q9Y2U2 307 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 HSPB11Q9Y547 144 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 RIPK3Q9Y572 518 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 MAB21L2Q9Y586 359 aa3.96□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZSWIM8A7E2V4 1837 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CITO14578 2027 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RALGAPA2Q2PPJ7 1873 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 GBF1Q92538 1859 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A075B6Q4 140 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 OOEPA6NGQ2 149 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF98A6NK75 572 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ERI2A8K979 691 aaKnown RBP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 A8MX80 341 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 C2orf74A8MZ97 194 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 HACD1B0YJ81 288 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 G3V2T6 193 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC30A4O14863 429 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CIDEAO60543 219 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 LMX1BO60663 402 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 VPS26AO75436 327 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC22A3O75751 556 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC22A5O76082 557 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RHOBTB1O94844 696 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDK14O94921 469 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLITRK3O94933 977 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 OLFM2O95897 454 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 IGLV2-11P01706 119 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 C9P02748 559 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 S100A8P05109 93 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC2A3P11169 496 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CD36P16671 472 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF3P17036 446 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF30P17039 623 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 EPORP19235 508 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CPN2P22792 545 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 RPS3P23396 243 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 KDELR1P24390 212 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 IGFBP5P24593 272 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 HTR1EP28566 365 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ALDH4A1P30038 563 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SDC4P31431 198 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 SOAT1P35610 550 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 DNAJB13P59910 316 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 HERV-K104P61576 105 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 VBP1P61758 197 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 NCS1P62166 190 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 IFITM3Q01628 133 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 CYP24A1Q07973 514 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 MGAT3Q09327 533 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 GPR17Q13304 367 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 DGCR6Q14129 220 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 PON2Q15165 354 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 MEP1BQ16820 701 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 IMPG1Q17R60 797 aa3.95□□□□□ -1.78
HMGB1P16-201ENST00000447155 ADPRMQ3LIE5 342 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms