RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 ACOT8O14734 319 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SULT1B1O43704 296 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CTSCP53634 463 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 DLX5P56178 289 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SLC35D2Q76EJ3 337 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 SPNS2Q8IVW8 549 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 ZMAT3Q9HA38 289 aaKnown RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 TP53I11O14683 189 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 CD79AP11912 226 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 TAS2R19P59542 299 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 MRPL49Q13405 166 aaKnown RBP11.27□□□□□ -0.61
UBR4-205ENST00000417040 OR52W1Q6IF63 320 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 TERB2Q8NHR7 220 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 NTMT1Q9BV86 223 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 POLHQ9Y253 713 aa11.27□□□□□ -0.61
UBR4-205ENST00000417040 IMPA2O14732 288 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 AK1P00568 194 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ERVFC1P60507 584 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ESCO2Q56NI9 601 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ANKRD34AQ69YU3 496 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 MIB2Q96AX9 1013 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 MYADMQ96S97 322 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 NMNAT2Q9BZQ4 307 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 AKAP12Q02952 1782 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ZC3H12DA2A288 527 aaKnown RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 CCSO14618 274 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 CA12O43570 354 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 SOX9P48436 509 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 HHEXQ03014 270 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 CST9LP1Q5W188 147 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 TRMT2BQ96GJ1 504 aaKnown RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 PELOQ9BRX2 385 aaKnown RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 NME7Q9Y5B8 376 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 A0A0A6YYC8 382 aaPredicted RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 HEPACAM2A8MVW5 462 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 I3L1I5 382 aaPredicted RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 NFKBIEO00221 500 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 UBL4AP11441 157 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 CST6Q15828 149 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 HEPHL1Q6MZM0 1159 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 SFXN4Q6P4A7 337 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ZNF704Q6ZNC4 412 aaPredicted RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 FAM213BQ8TBF2 198 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 FAM86C1Q9NVL1 165 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 FTSJ1Q9UET6 329 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 Q9Y3F1 56 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 TEX51A0A1B0GUA7 166 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 TCRBP04435 133 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 CCL5P13501 91 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 MPP7Q5T2T1 576 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 MCATQ8IVS2 390 aaKnown RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 KDM8Q8N371 416 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 ZNF583Q96ND8 569 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 HHIPQ96QV1 700 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 TMEM100Q9NV29 134 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 IL17CQ9P0M4 197 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 SERPINE2P07093 398 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 NTHL1P78549 312 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 INAVAQ3KP66 663 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 PRAMEF9Q5VWM5 478 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 FAM83HQ6ZRV2 1179 aaPredicted RBP11.26□□□□□ -0.61
UBR4-205ENST00000417040 ADGRF3Q8IZF5 1079 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 OR52H1Q8NGJ2 320 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 URGCP-MRPS24S4R325 110 aa11.26□□□□□ -0.61
UBR4-205ENST00000417040 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 TGM6O95932 706 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 RPS19P39019 145 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 PLA2G7Q13093 441 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 MEF2DQ14814 521 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 ZNF750Q32MQ0 723 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 PLK5Q496M5 336 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 AVPI1Q5T686 147 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 SLC46A3Q7Z3Q1 461 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 CMTM1Q8IZ96 169 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 OR14L1PQ8NHC6 308 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 ACOT11Q8WXI4 607 aaPredicted RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 NT5DC2Q9H857 520 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 TMX2-CTNND1H3BSU7 103 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 EIF2DP41214 584 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 RAB28P51157 221 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 MLC1Q15049 377 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 LTC4SQ16873 150 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 PAPD4Q6PIY7 484 aaKnown RBP11.25□□□□□ -0.61
UBR4-205ENST00000417040 GPR78Q96P69 363 aa11.25□□□□□ -0.61
UBR4-205ENST00000417040 NCDNQ9UBB6 729 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms