RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CCNA2P20248 432 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 ENPP1P22413 925 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 TACR3P29371 465 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 GYS2P54840 703 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 MYBPHQ13203 477 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 ADRM1Q16186 407 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 DHRS4L2Q6PKH6 230 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 FCRLAQ7L513 359 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 NET1Q7Z628 596 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-202ENST00000340477 ARPINQ7Z6K5 226 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 PATL1Q86TB9 770 aaKnown RBP17.18■□□□□ 0.34
SYNE4-202ENST00000340477 MTDHQ86UE4 582 aaKnown RBP17.18■□□□□ 0.34
SYNE4-202ENST00000340477 DMRTC2Q8IXT2 367 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-202ENST00000340477 SLC43A2Q8N370 569 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 CLIP4Q8N3C7 705 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 OR6K3Q8NGY3 331 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 RNF128Q8TEB7 428 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 ZNF524Q96C55 264 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 SLC39A3Q9BRY0 314 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 TACO1Q9BSH4 297 aaKnown RBP17.18■□□□□ 0.34
SYNE4-202ENST00000340477 SRXN1Q9BYN0 137 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 FANCFQ9NPI8 374 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 JKAMPQ9P055 326 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 AP3M1Q9Y2T2 418 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 TMED7Q9Y3B3 224 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 HDGFL3Q9Y3E1 203 aa17.18■□□□□ 0.34
SYNE4-202ENST00000340477 ZNF208O43345 1280 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SNX3O60493 162 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 ADAM11O75078 769 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SS18L1O75177 396 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-202ENST00000340477 COX4I1P13073 169 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 DRD4P21917 467 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SSTR2P30874 369 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 PCGF2P35227 344 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 DIO1P49895 249 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SORDQ00796 357 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 TMEM201Q5SNT2 666 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 ERICH5Q6P6B1 374 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 VWA1Q6PCB0 445 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 TMPPEQ6ZT21 453 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 STK32CQ86UX6 486 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 PTOV1Q86YD1 416 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 POU5F2Q8N7G0 328 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 ACBD4Q8NC06 268 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SLC26A7Q8TE54 656 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 ROBO4Q8WZ75 1007 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 RCN3Q96D15 328 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 SELENONQ9NZV5 590 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 KLHL9Q9P2J3 617 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 KCNN3Q9UGI6 736 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 OSGIN1Q9UJX0 560 aa17.17■□□□□ 0.34
SYNE4-202ENST00000340477 DNPH1O43598 174 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 PRKD3O94806 890 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 CD8BP10966 210 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 KIR2DL2P43627 348 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-202ENST00000340477 KIR2DL3P43628 341 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 KCNJ5P48544 419 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 RGS8P57771 180 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-202ENST00000340477 RABL3Q5HYI8 236 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 CRYBG3Q68DQ2 2970 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 RANBP3LQ86VV4 465 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-202ENST00000340477 ADGRG3Q86Y34 549 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 ZZZ3Q8IYH5 903 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 RASSF5Q8WWW0 418 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 STARD4Q96DR4 205 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 CMTM5Q96DZ9 223 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 ZNF559Q9BR84 538 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 EFCAB1Q9HAE3 211 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 GP6Q9HCN6 339 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 GALNT8Q9NY28 637 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 CLEC4AQ9UMR7 237 aa17.16■□□□□ 0.34
SYNE4-202ENST00000340477 A8MXE2 369 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 FXYD1O00168 92 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 AIM2O14862 343 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 FRS3O43559 492 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 PMS2P2O95744 297 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 FESP07332 822 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 ACAA2P42765 397 aaKnown RBP17.15■□□□□ 0.34
SYNE4-202ENST00000340477 PCBP3P57721 371 aaKnown RBP17.15■□□□□ 0.34
SYNE4-202ENST00000340477 VMACQ2NL98 169 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 BTLAQ7Z6A9 289 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 ABHD3Q8WU67 409 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 ADAM19Q9H013 955 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 PIF1Q9H611 641 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 TMEM181Q9P2C4 612 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 KLHL13Q9P2N7 655 aa17.15■□□□□ 0.34
SYNE4-202ENST00000340477 TESQ9UGI8 421 aaKnown RBP17.15■□□□□ 0.34
SYNE4-202ENST00000340477 IGHV3-15A0A0B4J1V0 119 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 TMEM72A0PK05 275 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 TUBAL3A6NHL2 446 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 PRG2P13727 222 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 AGTR1P30556 359 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 OR2B6P58173 313 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 RASGEF1BQ0VAM2 473 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 GUSBP1Q15486 140 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 OR52E4Q8NGH9 312 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 C14orf79Q96F83 325 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 TRIM2Q9C040 744 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 OR11A1Q9GZK7 315 aa17.14■□□□□ 0.33
SYNE4-202ENST00000340477 OPN3Q9H1Y3 402 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms